ID B2IFR3_BEII9 Unreviewed; 348 AA.
AC B2IFR3;
DT 10-JUN-2008, integrated into UniProtKB/TrEMBL.
DT 10-JUN-2008, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACB94274.1};
DE EC=5.1.1.1 {ECO:0000313|EMBL:ACB94274.1};
GN OrderedLocusNames=Bind_0624 {ECO:0000313|EMBL:ACB94274.1};
OS Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB
OS 8712).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Beijerinckiaceae; Beijerinckia.
OX NCBI_TaxID=395963 {ECO:0000313|EMBL:ACB94274.1, ECO:0000313|Proteomes:UP000001695};
RN [1] {ECO:0000313|Proteomes:UP000001695}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9039 / DSM 1715 / NCIMB 8712
RC {ECO:0000313|Proteomes:UP000001695};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., LaButti K., Schmutz J., Larimer F.,
RA Land M., Hauser L., Kyrpides N., Mikhailova N., Dunfield P.F., Dedysh S.N.,
RA Liesack W., Saw J.H., Alam M., Chen Y., Murrell J.C., Richardson P.;
RT "Complete sequence of chromosome of Beijerinckia indica subsp. indica ATCC
RT 9039.";
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACB94274.1, ECO:0000313|Proteomes:UP000001695}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 9039 / DSM 1715 / NCIMB 8712
RC {ECO:0000313|Proteomes:UP000001695};
RX PubMed=20601475; DOI=10.1128/JB.00656-10;
RA Tamas I., Dedysh S.N., Liesack W., Stott M.B., Alam M., Murrell J.C.,
RA Dunfield P.F.;
RT "Complete genome sequence of Beijerinckia indica subsp. indica.";
RL J. Bacteriol. 192:4532-4533(2010).
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DR EMBL; CP001016; ACB94274.1; -; Genomic_DNA.
DR RefSeq; WP_012383632.1; NC_010581.1.
DR AlphaFoldDB; B2IFR3; -.
DR STRING; 395963.Bind_0624; -.
DR KEGG; bid:Bind_0624; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_6_0_5; -.
DR OrthoDB; 7170131at2; -.
DR Proteomes; UP000001695; Chromosome.
DR GO; GO:0008784; F:alanine racemase activity; IEA:UniProtKB-EC.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd06289; PBP1_MalI-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF152; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Isomerase {ECO:0000313|EMBL:ACB94274.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001695};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 348 AA; 37936 MW; BAEF4563A48831DA CRC64;
MSNDRQKRRV SLIDVAQAAG VSRATASLVL RESPLVAAET RKRVRKAMTK LGYIYNRGAA
NMRRNRSGSI GLLLCNIGSP FYAELMAGID QVMDAQDIVS LLANSVESPE RQFRQLHRLR
EYNVDGIVLC PAAGTSADLL DELNRLSLPC VQTLRYLSPK KGDYVGADYE FGVEQAVEHL
VRNGRRRIAF IGGNQLHSAA RERLSGFRRA LHRHGLSHDL ILPTNLTSAD GAEALDALLS
RDNPADAAIC YNDMVALGVT SRLLSKGLHP GAEFAVIGTD DLPNAATAWP ALTTIATNPR
AVGEAAARLL LRRIEQPDGT EERILLPPKL IIRDSCGGRT NTLERQAS
//
