GenomeNet

Database: UniProt
Entry: B2TCM4_PARPJ
LinkDB: B2TCM4_PARPJ
Original site: B2TCM4_PARPJ 
ID   B2TCM4_PARPJ            Unreviewed;       358 AA.
AC   B2TCM4;
DT   01-JUL-2008, integrated into UniProtKB/TrEMBL.
DT   01-JUL-2008, sequence version 1.
DT   24-JAN-2024, entry version 99.
DE   SubName: Full=Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACD19448.1};
GN   OrderedLocusNames=Bphyt_5085 {ECO:0000313|EMBL:ACD19448.1};
OS   Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
OS   (Burkholderia phytofirmans).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=398527 {ECO:0000313|EMBL:ACD19448.1, ECO:0000313|Proteomes:UP000001739};
RN   [1] {ECO:0000313|EMBL:ACD19448.1, ECO:0000313|Proteomes:UP000001739}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17436 / LMG 22146 / PsJN
RC   {ECO:0000313|Proteomes:UP000001739};
RX   PubMed=21551308; DOI=10.1128/JB.05055-11;
RA   Weilharter A., Mitter B., Shin M.V., Chain P.S., Nowak J., Sessitsch A.;
RT   "Complete genome sequence of the plant growth-promoting endophyte
RT   Burkholderia phytofirmans strain PsJN.";
RL   J. Bacteriol. 193:3383-3384(2011).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP001053; ACD19448.1; -; Genomic_DNA.
DR   RefSeq; WP_012426959.1; NC_010676.1.
DR   AlphaFoldDB; B2TCM4; -.
DR   STRING; 398527.Bphyt_5085; -.
DR   KEGG; bpy:Bphyt_5085; -.
DR   eggNOG; COG4977; Bacteria.
DR   HOGENOM; CLU_000445_59_0_4; -.
DR   OMA; HWASAEH; -.
DR   OrthoDB; 9177852at2; -.
DR   Proteomes; UP000001739; Chromosome 2.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd03137; GATase1_AraC_1; 1.
DR   Gene3D; 3.40.50.880; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR029062; Class_I_gatase-like.
DR   InterPro; IPR002818; DJ-1/PfpI.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR43130:SF3; THIJ/PFPI FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14240); 1.
DR   Pfam; PF01965; DJ-1_PfpI; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 2.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125}.
FT   DOMAIN          219..317
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01124"
SQ   SEQUENCE   358 AA;  39644 MW;  C23EF9C393E29EA6 CRC64;
     MKHIKVGMVV FPGFQLLDIA GPKDAFAEVK ILSKGESEYE MLTVGTTRGS LQSSSGLTIM
     PDRTIFDVCP EFDTIIVPGG LGIFEAFDDP ALSGWLKDRH KQCRRMSAIC NGLFALGSAG
     LLDNRVVTTH WMDVPRLAAT FPKARIEPDH IYVQDGSIFT TAGVTAGIDL SLAMIEADFG
     RQMALDVAKY LVVYLRRAGG QSQFSPLLEV QASPSTQTLL LQQYMLDNLH VDHTVTTLAE
     RAHMSARNLS RTFMKECGVT PMTFLSHARI DAARHYLEAT TLPLREIARR CGFDNTDGFR
     RIFQRRLQIN PAEYRERFRS SNGSSRNGVG TVLAETRHAD SASRAINTSI KARTLAEE
//
DBGET integrated database retrieval system