ID B4FAP9_MAIZE Unreviewed; 713 AA.
AC B4FAP9;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 24-JAN-2024, entry version 99.
DE SubName: Full=Tetratricopeptide repeat (TPR)-like superfamily protein {ECO:0000313|EMBL:AQK54599.1};
GN Name=100191930 {ECO:0000313|EnsemblPlants:Zm00001eb188550_P001};
GN ORFNames=ZEAMMB73_Zm00001d051589 {ECO:0000313|EMBL:AQK54599.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACF79192.1};
RN [1] {ECO:0000313|EMBL:ACF79192.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACF79192.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EnsemblPlants:Zm00001eb188550_P001, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb188550_P001,
RC ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [3] {ECO:0000313|EMBL:AQK54599.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK54599.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:Zm00001eb188550_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb188550_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; BT034187; ACF79192.1; -; mRNA.
DR EMBL; CM000780; AQK54599.1; -; Genomic_DNA.
DR EMBL; CM000780; AQK54601.1; -; Genomic_DNA.
DR RefSeq; NP_001130826.1; NM_001137354.1.
DR AlphaFoldDB; B4FAP9; -.
DR SMR; B4FAP9; -.
DR IntAct; B4FAP9; 5.
DR STRING; 4577.B4FAP9; -.
DR PaxDb; 4577-GRMZM2G060947_P01; -.
DR EnsemblPlants; Zm00001eb188550_T001; Zm00001eb188550_P001; Zm00001eb188550.
DR GeneID; 100191930; -.
DR Gramene; Zm00001eb188550_T001; Zm00001eb188550_P001; Zm00001eb188550.
DR KEGG; zma:100191930; -.
DR eggNOG; KOG1840; Eukaryota.
DR HOGENOM; CLU_021284_1_0_1; -.
DR InParanoid; B4FAP9; -.
DR OrthoDB; 2915282at2759; -.
DR Proteomes; UP000007305; Chromosome 4.
DR ExpressionAtlas; B4FAP9; baseline and differential.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR46284; PROTEIN KINESIN LIGHT CHAIN-RELATED 3; 1.
DR PANTHER; PTHR46284:SF5; PROTEIN KINESIN LIGHT CHAIN-RELATED 3; 1.
DR Pfam; PF13424; TPR_12; 2.
DR Pfam; PF13181; TPR_8; 1.
DR Pfam; PF17874; TPR_MalT; 1.
DR SMART; SM00028; TPR; 9.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 2.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:B4FAP9};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 418..451
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 503..536
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..43
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..82
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 86..117
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 713 AA; 77498 MW; 7ECC07B326782F28 CRC64;
MPGITEDGVV AEEVPNGVNF SPQNESLPAP KSTAASTMAG SMQSEALEMH VEASGAGEPS
IEQLYNNVCE MESSSEGGSP SRESFGSDGE ESRIDSELRH LVAGEMEAMK VIEEEEENGS
VANVVPPAPA ENGTPVKEHS SSSSKKSKKA SKSQLESDAS VGLNGKASTE EGESEVSKPA
SRVGRRRKSN ANPQSGTEDA GLDNPDLGPF LLKHARDLIA SENPRRALKY ALRATKSFEK
CAGGKPSLNL VMSLHVVAAI YCNLGKYEEA VPVLHRSIEI PVIEEGQEHA LAKFSGCMQL
GDTYGMLGQT AHSLQWYASG LEIQKQTLGE QDPRVGETCR YLAEAHVQAL QLDEAQRLCQ
IALDIHREHR ETASLEETAD RRLMGLICDT KGDHEAALEH LVMASMSMVA NGQETEVASV
DCSIGDIYLS LGRYDEAVFA YQKALTVFKT SKGENHATVA SVFVRLADLY NKTGKLRESK
SYCENALKIY QKPIPGTSLE EIATGLTDVS AIYETMNEHE QALKLLQKAL KMYNNSAGQQ
STIAGIEAQM GVLHYILGNY GESYDSFKSA IAKLRTCGEK KSAFFGIALN QMGLACVQRY
SINEAAELFE EARTVLEQEY GPYHPDTLGV YSNLAGTYDA MGRLDEAIEI LEYVVGMREE
KLGTANPDVD DEKRRLGELL KEAGRVRSRK AKSLENLLET NPYIATKRNA VAA
//
