ID B4FCH1_MAIZE Unreviewed; 322 AA.
AC B4FCH1;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE SubName: Full=Zinc ion binding {ECO:0000313|EMBL:AQK63208.1};
GN Name=100192745 {ECO:0000313|EnsemblPlants:Zm00001eb215660_P001};
GN ORFNames=ZEAMMB73_Zm00001d013361 {ECO:0000313|EMBL:AQK63208.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACF79814.1};
RN [1] {ECO:0000313|EMBL:ACF79814.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACF79814.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EnsemblPlants:Zm00001eb215660_P001, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb215660_P001,
RC ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [3] {ECO:0000313|EMBL:AQK63208.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK63208.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:Zm00001eb215660_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb215660_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; BT034809; ACF79814.1; -; mRNA.
DR EMBL; CM000781; AQK63208.1; -; Genomic_DNA.
DR RefSeq; NP_001131416.1; NM_001137944.2.
DR AlphaFoldDB; B4FCH1; -.
DR SMR; B4FCH1; -.
DR STRING; 4577.B4FCH1; -.
DR PaxDb; 4577-GRMZM2G005365_P03; -.
DR EnsemblPlants; Zm00001eb215660_T001; Zm00001eb215660_P001; Zm00001eb215660.
DR EnsemblPlants; Zm00001eb215660_T005; Zm00001eb215660_P005; Zm00001eb215660.
DR GeneID; 100192745; -.
DR Gramene; Zm00001eb215660_T001; Zm00001eb215660_P001; Zm00001eb215660.
DR Gramene; Zm00001eb215660_T005; Zm00001eb215660_P005; Zm00001eb215660.
DR KEGG; zma:100192745; -.
DR eggNOG; KOG3268; Eukaryota.
DR OMA; NRPFHAK; -.
DR OrthoDB; 11501at2759; -.
DR Proteomes; UP000007305; Chromosome 5.
DR ExpressionAtlas; B4FCH1; baseline and differential.
DR GO; GO:0043240; C:Fanconi anaemia nuclear complex; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0006281; P:DNA repair; IBA:GO_Central.
DR GO; GO:0036297; P:interstrand cross-link repair; IEA:InterPro.
DR GO; GO:0006513; P:protein monoubiquitination; IBA:GO_Central.
DR CDD; cd16490; RING-CH-C4HC3_FANCL; 1.
DR Gene3D; 3.10.110.20; RWD domain-like; 1.
DR Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR026848; Fancl.
DR InterPro; IPR026850; FANCL_C.
DR InterPro; IPR043898; FANCL_d2.
DR InterPro; IPR044037; FANCL_d3.
DR InterPro; IPR043003; FANCL_d3_sf.
DR InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13206:SF0; E3 UBIQUITIN-PROTEIN LIGASE FANCL; 1.
DR PANTHER; PTHR13206; UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEIN; 1.
DR Pfam; PF11793; FANCL_C; 1.
DR Pfam; PF18890; FANCL_d2; 1.
DR Pfam; PF18891; FANCL_d3; 1.
DR SMART; SM01197; FANCL_C; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000007305}.
FT DOMAIN 45..132
FT /note="FANCL UBC-like"
FT /evidence="ECO:0000259|Pfam:PF18890"
FT DOMAIN 136..232
FT /note="FANCL UBC-like"
FT /evidence="ECO:0000259|Pfam:PF18891"
FT DOMAIN 244..319
FT /note="FANCL C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11793"
FT REGION 1..42
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..36
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 322 AA; 35985 MW; A0E2F4BA7B0B2CBF CRC64;
MDSPVPATLA RAPARPQARA GEEACADTRQ DAPAEAEPPP RRPAAFYSSV FAQIEEIGWK
QLVSATGDGV SCLTFRVVDE PGRMHLLEIT LPMGYPESPP SISADVPYLP KIHWSKNSRL
KDVICQFQAH LKILQEFWNT MDEIDKVLWI VDPTKPSYAM SHRRIALGDD CYILLQVDAR
KPNSLPECRF LGTDGKLDQL IINWRKNRKK WDTKKKFHEN LAAVLDFALP SPPSVGDKAK
DDEQADCGIC YAKHLPVDDE LGAHSGCATD YMCENPSCSR AFHSVCLRDW LRSITTTRQS
FDVLFGNCPY CSDPVAVKIT GH
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