ID B4FEJ8_MAIZE Unreviewed; 453 AA.
AC B4FEJ8;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 28-JUL-2009, sequence version 2.
DT 27-MAR-2024, entry version 102.
DE SubName: Full=G2-like transcription factor {ECO:0000313|EMBL:AIB04329.1};
DE SubName: Full=Myb-like transcription factor family protein {ECO:0000313|EMBL:AQK39280.1};
GN Name=100193306 {ECO:0000313|EnsemblPlants:Zm00001eb406660_P001};
GN Synonyms=GLK5 {ECO:0000313|EMBL:AIB04329.1};
GN ORFNames=ZEAMMB73_Zm00001d023411 {ECO:0000313|EMBL:AQK39280.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACF80541.2};
RN [1] {ECO:0000313|EMBL:ACF80541.2}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACF80541.2};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EnsemblPlants:Zm00001eb406660_P001, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb406660_P001,
RC ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [3] {ECO:0000313|EMBL:AIB04329.1}
RP NUCLEOTIDE SEQUENCE.
RA Burdo B., Gray J., Goetting-Minesky M.P., Wittler B., Hunt M., Li T.,
RA Velliquette D., Thomas J., Gentzel I., Dos Santos Brito M.,
RA Mejia-Guerra M.K., Connolly L.N., Qaisi D., Li W., Casas M.I., Doseff A.I.,
RA Grotewold E.;
RT "The Maize TFome - Development of a transcription factor open reading frame
RT collection for functional genomics.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AQK39280.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK39280.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EnsemblPlants:Zm00001eb406660_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb406660_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; BT035536; ACF80541.2; -; mRNA.
DR EMBL; KJ726838; AIB04329.1; -; mRNA.
DR EMBL; CM000786; AQK39280.1; -; Genomic_DNA.
DR RefSeq; NP_001131917.2; NM_001138445.2.
DR AlphaFoldDB; B4FEJ8; -.
DR SMR; B4FEJ8; -.
DR STRING; 4577.B4FEJ8; -.
DR PaxDb; 4577-GRMZM2G016370_P01; -.
DR EnsemblPlants; Zm00001eb406660_T001; Zm00001eb406660_P001; Zm00001eb406660.
DR GeneID; 100193306; -.
DR Gramene; Zm00001eb406660_T001; Zm00001eb406660_P001; Zm00001eb406660.
DR KEGG; zma:100193306; -.
DR eggNOG; ENOG502QSXV; Eukaryota.
DR HOGENOM; CLU_036551_0_0_1; -.
DR OMA; RYHEYVE; -.
DR OrthoDB; 5491517at2759; -.
DR Proteomes; UP000007305; Chromosome 10.
DR ExpressionAtlas; B4FEJ8; baseline and differential.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR044787; HRS1-like.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR006447; Myb_dom_plants.
DR InterPro; IPR001005; SANT/Myb.
DR NCBIfam; TIGR01557; myb_SHAQKYF; 1.
DR PANTHER; PTHR31003; MYB FAMILY TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR31003:SF16; TRANSCRIPTION FACTOR HHO2; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
PE 2: Evidence at transcript level;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305}.
FT DOMAIN 274..332
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT REGION 115..150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 200..277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 394..453
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..219
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 245..273
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 421..453
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 453 AA; 48702 MW; C9871EF862DCD84D CRC64;
MEMDPPPPPP LHADRRLRFR DYLLALEEER RKIQVFQREL PLCLDLVTQT IEGMRSHMDS
VVVGSEETVS DHGGPVLEEF MPLKPTTLSS SSSQPQSQDD HDSAHYLEHR RAAAATANDV
VDADKDDEAL GDPETAAASS SRPLPHPETK KAMPDWLQSV QLWSNQQQPS VSPPQHQDEL
LLPCRPVALN ACRKSGGAFQ PFEKEKKKED KEEKQRAELE LPLPAAASSA VVGDSCDRAG
ATDTDTDTAE NNKASSTKGG KDKEAQLSSQ APSRKARRCW APELHRRFLQ ALQQLGGSHV
ATPKQIRELM NVDGLTNDEV KSHLQKYRLH TRRPNSAAAA VQSGGTSVVA PPAAPQFVVV
GGIWVPPPEY AAAAAAQPQQ VHVHLAGDAS GTTTTAADKV YAPVATTLTP APRPRPRPGP
ERQSSSCSGA RRNGDACSGS PAVSSSSSQT ASA
//
