ID B4FIN9_MAIZE Unreviewed; 322 AA.
AC B4FIN9;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE RecName: Full=Nuclear transcription factor Y subunit {ECO:0000256|RuleBase:RU367155};
GN Name=100283565 {ECO:0000313|EnsemblPlants:Zm00001eb050320_P001};
GN Synonyms=CA2P6 {ECO:0000313|EMBL:AIB05778.1};
GN ORFNames=ZEAMMB73_Zm00001d033215 {ECO:0000313|EMBL:ONM06984.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACF81982.1};
RN [1] {ECO:0000313|EMBL:ACF81982.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACF81982.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:AIB05778.1}
RP NUCLEOTIDE SEQUENCE.
RA Burdo B., Gray J., Goetting-Minesky M.P., Wittler B., Hunt M., Li T.,
RA Velliquette D., Thomas J., Gentzel I., Dos Santos Brito M.,
RA Mejia-Guerra M.K., Connolly L.N., Qaisi D., Li W., Casas M.I., Doseff A.I.,
RA Grotewold E.;
RT "The Maize TFome - Development of a transcription factor open reading frame
RT collection for functional genomics.";
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ONM06984.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb050320_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM06984.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:Zm00001eb050320_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb050320_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
CC -!- FUNCTION: Component of the sequence-specific heterotrimeric
CC transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3'
CC box motif found in the promoters of its target genes.
CC {ECO:0000256|RuleBase:RU367155}.
CC -!- SUBUNIT: Heterotrimer. {ECO:0000256|RuleBase:RU367155}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU367155}.
CC -!- SIMILARITY: Belongs to the NFYA/HAP2 subunit family.
CC {ECO:0000256|RuleBase:RU367155}.
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DR EMBL; BT036977; ACF81982.1; -; mRNA.
DR EMBL; BT041906; ACF86911.1; -; mRNA.
DR EMBL; KJ728287; AIB05778.1; -; mRNA.
DR EMBL; CM007647; ONM06984.1; -; Genomic_DNA.
DR EMBL; CM007647; ONM06986.1; -; Genomic_DNA.
DR RefSeq; NP_001149937.1; NM_001156465.1.
DR RefSeq; XP_008677578.1; XM_008679356.1.
DR RefSeq; XP_008677580.1; XM_008679358.1.
DR AlphaFoldDB; B4FIN9; -.
DR SMR; B4FIN9; -.
DR STRING; 4577.B4FIN9; -.
DR PaxDb; 4577-GRMZM5G829103_P07; -.
DR EnsemblPlants; Zm00001eb050320_T001; Zm00001eb050320_P001; Zm00001eb050320.
DR EnsemblPlants; Zm00001eb050320_T004; Zm00001eb050320_P004; Zm00001eb050320.
DR EnsemblPlants; Zm00001eb050320_T007; Zm00001eb050320_P007; Zm00001eb050320.
DR GeneID; 100283565; -.
DR Gramene; Zm00001eb050320_T001; Zm00001eb050320_P001; Zm00001eb050320.
DR Gramene; Zm00001eb050320_T004; Zm00001eb050320_P004; Zm00001eb050320.
DR Gramene; Zm00001eb050320_T007; Zm00001eb050320_P007; Zm00001eb050320.
DR KEGG; zma:100283565; -.
DR eggNOG; KOG1561; Eukaryota.
DR InParanoid; B4FIN9; -.
DR OMA; PWWAGSQ; -.
DR OrthoDB; 1119073at2759; -.
DR Proteomes; UP000007305; Chromosome 1.
DR ExpressionAtlas; B4FIN9; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR Gene3D; 6.10.250.2430; -; 1.
DR InterPro; IPR001289; NFYA.
DR PANTHER; PTHR12632:SF101; NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT; 1.
DR PANTHER; PTHR12632; TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED; 1.
DR Pfam; PF02045; CBFB_NFYA; 1.
DR PRINTS; PR00616; CCAATSUBUNTB.
DR SMART; SM00521; CBF; 1.
DR PROSITE; PS51152; NFYA_HAP2_2; 1.
PE 2: Evidence at transcript level;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU367155};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU367155};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU367155};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU367155}.
FT REGION 16..55
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 220..247
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 322 AA; 34123 MW; E4B2D9873DDB117E CRC64;
MMSFKGHEGF GQVAAAGAGS QAASHGGAGP LPWWAGPQLL FGEPAPPSPE ETRRDAQFQV
VPGVQGTPDP APPKTGTPEV LKFSVFQGNL ESGGKGEKTP KNSTTIALQS PFPEYNGRFE
IGLGQSMLAP SNYPCADQCY GMLAAYGMRS MSGGRMLLPL NATADAPIYV NPKQYEGILR
RRRARAKAES ENRLAKGRKP YLHESRHLHA MRRVRGTGGR FVNTKKEGRG TGVASNGGSK
TAAAAPSRLA MPPSFQSSVA SLSGSDVSNM YSGGLEQHLR APHFFTPLPP IMEDGDHGGP
PTRISSSFKW AASDGCCELL KA
//
