ID B4FPK4_MAIZE Unreviewed; 332 AA.
AC B4FPK4;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 24-JAN-2024, entry version 89.
DE SubName: Full=THO complex subunit 3 {ECO:0000313|EMBL:ONM54088.1};
GN ORFNames=ZEAMMB73_Zm00001d020011 {ECO:0000313|EMBL:ONM54088.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACF84047.1};
RN [1] {ECO:0000313|EMBL:ACF84047.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACF84047.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:ONM54088.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM54088.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; BT039042; ACF84047.1; -; mRNA.
DR EMBL; CM007650; ONM54088.1; -; Genomic_DNA.
DR RefSeq; NP_001140542.1; NM_001147070.1.
DR AlphaFoldDB; B4FPK4; -.
DR SMR; B4FPK4; -.
DR IntAct; B4FPK4; 13.
DR STRING; 4577.B4FPK4; -.
DR PaxDb; 4577-GRMZM2G078754_P03; -.
DR GeneID; 100272607; -.
DR KEGG; zma:100272607; -.
DR eggNOG; KOG1407; Eukaryota.
DR HOGENOM; CLU_045202_0_0_1; -.
DR InParanoid; B4FPK4; -.
DR OMA; NGLEIFH; -.
DR OrthoDB; 10464at2759; -.
DR ExpressionAtlas; B4FPK4; baseline and differential.
DR GO; GO:0000445; C:THO complex part of transcription export complex; IBA:GO_Central.
DR GO; GO:0006406; P:mRNA export from nucleus; IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR024977; Apc4-like_WD40_dom.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR040132; Tex1/THOC3.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22839:SF0; THO COMPLEX SUBUNIT 3; 1.
DR PANTHER; PTHR22839; THO COMPLEX SUBUNIT 3 THO3; 1.
DR Pfam; PF12894; ANAPC4_WD40; 1.
DR Pfam; PF00400; WD40; 3.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 2: Evidence at transcript level;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 34..68
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 80..122
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 204..245
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 251..300
FT /note="Anaphase-promoting complex subunit 4-like WD40"
FT /evidence="ECO:0000259|Pfam:PF12894"
FT REGION 1..24
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 332 AA; 36893 MW; 2BA7D73FE959A7D8 CRC64;
MESREEERKG SGGAAAGGGS TPGANLRDLV SREYYGHKKK VHSVAWNCLG TKLASGSIDH
TARVWSIDPH VHSKVKDIEL KGHTDSVDQL CWDPNHPDTV ATAAADKSIR LWDARSGKCQ
VVELSGENIN ITYKHDGTQI AVGNKEDELT ILDVRTLKVA KKHKSTYEMN EIAWNKAGDL
FFITTGLGHV EVVKDLEFLK PCKLNAHTAG CYCIAMDPLD RYFAVGSADS LVSLWNVKEL
LCIRTFTKLE WPVRTVSFSH TGEFIAYASE DPFIDIANVE TGRSIHQIPC KAAMNSVEWN
PKYNLLAYAG DDKNKYMTDE GVFRVFGFET HN
//
