ID B4FW77_MAIZE Unreviewed; 700 AA.
AC B4FW77;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Pentatricopeptide repeat-containing protein mitochondrial {ECO:0000313|EMBL:ONM33083.1};
GN Name=100273546 {ECO:0000313|EnsemblPlants:Zm00001eb135860_P001};
GN ORFNames=ZEAMMB73_Zm00001d041464 {ECO:0000313|EMBL:ONM33083.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACF86370.1};
RN [1] {ECO:0000313|EMBL:ACF86370.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=B73 {ECO:0000313|EMBL:ACF86370.1};
RX PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J.,
RA Walbot V., Yu Y.;
RT "Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.";
RL PLoS Genet. 5:E1000740-E1000740(2009).
RN [2] {ECO:0000313|EMBL:ONM33083.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb135860_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM33083.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001eb135860_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb135860_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; BT041365; ACF86370.1; -; mRNA.
DR EMBL; CM007649; ONM33083.1; -; Genomic_DNA.
DR RefSeq; NP_001141436.1; NM_001147964.1.
DR AlphaFoldDB; B4FW77; -.
DR SMR; B4FW77; -.
DR PaxDb; 4577-GRMZM2G162988_P01; -.
DR EnsemblPlants; Zm00001eb135860_T001; Zm00001eb135860_P001; Zm00001eb135860.
DR GeneID; 100273546; -.
DR Gramene; Zm00001eb135860_T001; Zm00001eb135860_P001; Zm00001eb135860.
DR KEGG; zma:100273546; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_30_3_1; -.
DR InParanoid; B4FW77; -.
DR OMA; TLMITCY; -.
DR OrthoDB; 1129877at2759; -.
DR Proteomes; UP000007305; Chromosome 3.
DR ExpressionAtlas; B4FW77; baseline and differential.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 12.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 9.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 48..82
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 110..140
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 142..176
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 234..268
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 296..330
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 358..392
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 420..454
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 490..520
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 521..555
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 674..700
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 700 AA; 77509 MW; 1195B3FDE631EDB0 CRC64;
MAAAAATKVT AAAAASAVFR SNKELTRLAR SGQLAAARRL FDAMPLRNTV TYNAMLSALA
RHGRIDEARA LFDGMPGRNT VSWNAMIAAL SDHGRVADAR SLFDRMPVRD EFSWTVMVSC
YARGGDLELA RDVLDRMPGD KCTACYNAMI SGYAKNGRFD DAMKLLREMP APDLVSWNSA
LAGLTQSGEM VRAVQFFDEM VKDMTSWNLM LAGFVRTGDL NAASSFFAKI ESPNVISWVT
LLNGYCRAGR IADARDLFDR MPERNVVAWN VMLDGYVHLS PIEEACKLFD EMPIKNSISW
TTIISGLARA GKLQEAKDLL DKMSFNCVAA KTALMHGYLQ RNMADDARRI FDGMEVHDTV
CWNTMISGYV QCGILEEAML LFQRMPNKDM VSWNTMIAGY AQDGQMHKAI GIFRRMNRRN
TVSWNSVISG FVQNDRFVDA LHHFMLMRRG TNRADWSTYA SCLRACANLA VLHVGRQLHN
LLVRSGHIND SFAGNALIST YAKCGRILEA KQIFDEMVYK DIVSWNALID GYASNGQGTE
AIAVFREMEA NGVRPDEVTF VGILSACSHA GLIDEGLFFF YSMTKEYLLK PVAEHYACMV
DLLGRAGKLN EAFELVQGMQ IQPNAGVWGA LLGACHMHKN HELAQLAAER LSELEPRKAS
NYVLLSNISA EAGKWDESEK ARASIKEKGV NKPPGLAGST
//
