ID B4WLU8_SYNS7 Unreviewed; 868 AA.
AC B4WLU8;
DT 23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 23-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE SubName: Full=Sigma-54 interaction domain family {ECO:0000313|EMBL:EDX85164.1};
GN ORFNames=S7335_2863 {ECO:0000313|EMBL:EDX85164.1};
OS Synechococcus sp. (strain ATCC 29403 / PCC 7335).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=91464 {ECO:0000313|EMBL:EDX85164.1, ECO:0000313|Proteomes:UP000005766};
RN [1] {ECO:0000313|EMBL:EDX85164.1, ECO:0000313|Proteomes:UP000005766}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29403 / PCC 7335 {ECO:0000313|Proteomes:UP000005766};
RA Tandeau de Marsac N., Ferriera S., Johnson J., Kravitz S., Beeson K.,
RA Sutton G., Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DS989904; EDX85164.1; -; Genomic_DNA.
DR RefSeq; WP_006454907.1; NZ_DS989904.1.
DR AlphaFoldDB; B4WLU8; -.
DR STRING; 91464.S7335_2863; -.
DR eggNOG; COG0348; Bacteria.
DR eggNOG; COG1221; Bacteria.
DR HOGENOM; CLU_017386_0_0_3; -.
DR OrthoDB; 9771372at2; -.
DR Proteomes; UP000005766; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0051536; F:iron-sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00038; CAP_ED; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR000595; cNMP-bd_dom.
DR InterPro; IPR018490; cNMP-bd_dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR002078; Sigma_54_int.
DR PANTHER; PTHR30224; ELECTRON TRANSPORT PROTEIN; 1.
DR PANTHER; PTHR30224:SF4; ELECTRON TRANSPORT PROTEIN YCCM-RELATED; 1.
DR Pfam; PF00027; cNMP_binding; 1.
DR Pfam; PF12801; Fer4_5; 2.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00100; cNMP; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR SUPFAM; SSF51206; cAMP-binding domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 1.
DR PROSITE; PS50042; CNMP_BINDING_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000005766}.
FT DOMAIN 33..134
FT /note="Cyclic nucleotide-binding"
FT /evidence="ECO:0000259|PROSITE:PS50042"
FT DOMAIN 182..406
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT DOMAIN 649..679
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 868 AA; 97508 MW; 2EA2A48FD34FA1A3 CRC64;
MDSSSASPLD NSESSFELGL SSEEIEWLRT ETIFRDLSPA LIEAIAPCLY KVPFAANRRL
ILEDTKPDAL YILRAGQLES YRTRRASQAT VTELHPGEVL HLQALLLEIA TAKTVVSQTD
CLLWKLEKSR FMQLAQDYPE LNGELSKLLA ACLEDVSEQL AYEQERQQAL RPYLVTRVKR
GVVGRSRYAS RLRQNIRDAT SLEAFSTNSS TTEERRPPVL IFGEPGLNKD NLAALIHFGS
ANKKQPMIQV NCENLRSQDL FGRGDSQPGL LEWLGSGTLL LNNIQDLDEK LKAPILSLLE
DGSYRPVSRE GDAPAASRRS FAWILVVAEK ALPEVAKRCA LQVKVPPLRL RKADIEALVT
YFAQLLCRQR KRSKVKLDSA ALRRLQSYDF PGNLTELESM VERAVNQSEG YILTEEVFWA
EENEKRRFRF DLLQGYPNLR QFLLSPWWPD RINYGFTLWF YPIIVAVLMW GPQARQTNFA
LNFFWAWWWP LVLIGFPFVG RLWCAVCPFM IYGEVVQKLS LIAWPRQLKA WPRTWAERWG
GWILYGGFAL ILLWEELWNL ENTAYLSGWL LLIITAGAIV CSVLFERRFW CRYLCPIGGM
NGLFAKLSMI ELRAQQGICS ATCNTYHCYK GGPAEGEGQA TGGCPVYSHP AQLSDNRNCV
LCMTCLKACP HKSVALNLRP PGIELWTTHQ PTSYEVALLL LLLGAVFLHR LPQLTTMVLG
DETVLNNFGG HAIAASIALF LPGAIALLVD KIRVHFQGTG ANRDFLTLAY GYLPLVLLAS
LAHYLLLGLS EGGQVISVFG ATIGWPIVGF QAIVDPAVIA FLQGTSLLLG ACLSIILTQK
IGRQSWLKLI PQHSLTLGFT LLFWQLIV
//
