ID B5DGJ4_SALSA Unreviewed; 259 AA.
AC B5DGJ4;
DT 14-OCT-2008, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2008, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE RecName: Full=Large ribosomal subunit protein eL6 {ECO:0000256|ARBA:ARBA00035233};
DE AltName: Full=60S ribosomal protein L6 {ECO:0000256|ARBA:ARBA00035351};
GN Name=rpl6 {ECO:0000313|EMBL:ACH70868.1,
GN ECO:0000313|RefSeq:NP_001135169.1, ECO:0000313|RefSeq:XP_014026066.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|EMBL:ACH70868.1};
RN [1] {ECO:0000313|EMBL:ACH70868.1, ECO:0000313|RefSeq:NP_001135169.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=White muscle {ECO:0000313|EMBL:ACH70868.1};
RX PubMed=19878547; DOI=10.1186/1471-2164-10-502;
RA Andreassen R., Lunner S., Hoyheim B.;
RT "Characterization of full-length sequenced cDNA inserts (FLIcs) from
RT Atlantic salmon (Salmo salar).";
RL BMC Genomics 10:502-502(2009).
RN [2] {ECO:0000313|RefSeq:NP_001135169.1, ECO:0000313|RefSeq:XP_014026066.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_014026066.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000256|ARBA:ARBA00004514}. Endoplasmic reticulum
CC {ECO:0000256|ARBA:ARBA00004240}. Rough endoplasmic reticulum
CC {ECO:0000256|ARBA:ARBA00004427}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL6 family.
CC {ECO:0000256|ARBA:ARBA00010592}.
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DR EMBL; BT043753; ACH70868.1; -; mRNA.
DR RefSeq; NP_001135169.1; NM_001141697.1.
DR RefSeq; XP_014026066.1; XM_014170591.1.
DR STRING; 8030.ENSSSAP00000044159; -.
DR PaxDb; 8030-ENSSSAP00000044159; -.
DR GeneID; 100196668; -.
DR KEGG; sasa:100196668; -.
DR CTD; 6128; -.
DR OrthoDB; 5483341at2759; -.
DR Proteomes; UP000087266; Chromosome ssa24.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd13156; KOW_RPL6; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR InterPro; IPR000915; 60S_ribosomal_eL6.
DR InterPro; IPR014722; Rib_uL2_dom2.
DR InterPro; IPR041997; Ribosomal_eL6_KOW.
DR InterPro; IPR005568; Ribosomal_uL6_N.
DR InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR PANTHER; PTHR20583; TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR20583:SF1; TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN; 1.
DR Pfam; PF01159; Ribosomal_L6e; 1.
DR Pfam; PF03868; Ribosomal_L6e_N; 1.
DR SUPFAM; SSF50104; Translation proteins SH3-like domain; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Isopeptide bond {ECO:0000256|ARBA:ARBA00022499};
KW Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW Ribonucleoprotein {ECO:0000313|EMBL:ACH70868.1,
KW ECO:0000313|RefSeq:NP_001135169.1};
KW Ribosomal protein {ECO:0000313|EMBL:ACH70868.1,
KW ECO:0000313|RefSeq:NP_001135169.1};
KW Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT DOMAIN 8..66
FT /note="Large ribosomal subunit protein uL6 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03868"
SQ SEQUENCE 259 AA; 29621 MW; F3563703470647EB CRC64;
MAEGDKKKVA KKAHCSRNPV LARGIGRYSR SAMYARRAMY KRKTKTTETK IEKKMKVKTP
STITKTVGGD KNGGTRVVKM RKMPRYYPTE DVPRKLKNHG KKPFSQHKRN LRATITPGTV
LVLLTGRHRG KRVVFLKQLS SGLLLVTGPL ALNRVPLRRA HQKFVIATAT KVDISGMKIP
KTLSDAYFKK KRLRRPRHQE GEIFDTEKEK YQLTVQRKED QKAVDSQLLP LIKKVPQLKG
YLRSSFCLSN GVYPHKLVF
//