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Database: UniProt
Entry: B5DGJ4_SALSA
LinkDB: B5DGJ4_SALSA
Original site: B5DGJ4_SALSA 
ID   B5DGJ4_SALSA            Unreviewed;       259 AA.
AC   B5DGJ4;
DT   14-OCT-2008, integrated into UniProtKB/TrEMBL.
DT   14-OCT-2008, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   RecName: Full=Large ribosomal subunit protein eL6 {ECO:0000256|ARBA:ARBA00035233};
DE   AltName: Full=60S ribosomal protein L6 {ECO:0000256|ARBA:ARBA00035351};
GN   Name=rpl6 {ECO:0000313|EMBL:ACH70868.1,
GN   ECO:0000313|RefSeq:NP_001135169.1, ECO:0000313|RefSeq:XP_014026066.1};
OS   Salmo salar (Atlantic salmon).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC   Salmonidae; Salmoninae; Salmo.
OX   NCBI_TaxID=8030 {ECO:0000313|EMBL:ACH70868.1};
RN   [1] {ECO:0000313|EMBL:ACH70868.1, ECO:0000313|RefSeq:NP_001135169.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=White muscle {ECO:0000313|EMBL:ACH70868.1};
RX   PubMed=19878547; DOI=10.1186/1471-2164-10-502;
RA   Andreassen R., Lunner S., Hoyheim B.;
RT   "Characterization of full-length sequenced cDNA inserts (FLIcs) from
RT   Atlantic salmon (Salmo salar).";
RL   BMC Genomics 10:502-502(2009).
RN   [2] {ECO:0000313|RefSeq:NP_001135169.1, ECO:0000313|RefSeq:XP_014026066.1}
RP   IDENTIFICATION.
RC   TISSUE=Muscle {ECO:0000313|RefSeq:XP_014026066.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC       {ECO:0000256|ARBA:ARBA00004514}. Endoplasmic reticulum
CC       {ECO:0000256|ARBA:ARBA00004240}. Rough endoplasmic reticulum
CC       {ECO:0000256|ARBA:ARBA00004427}.
CC   -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL6 family.
CC       {ECO:0000256|ARBA:ARBA00010592}.
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DR   EMBL; BT043753; ACH70868.1; -; mRNA.
DR   RefSeq; NP_001135169.1; NM_001141697.1.
DR   RefSeq; XP_014026066.1; XM_014170591.1.
DR   STRING; 8030.ENSSSAP00000044159; -.
DR   PaxDb; 8030-ENSSSAP00000044159; -.
DR   GeneID; 100196668; -.
DR   KEGG; sasa:100196668; -.
DR   CTD; 6128; -.
DR   OrthoDB; 5483341at2759; -.
DR   Proteomes; UP000087266; Chromosome ssa24.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   CDD; cd13156; KOW_RPL6; 1.
DR   Gene3D; 2.30.30.30; -; 1.
DR   InterPro; IPR000915; 60S_ribosomal_eL6.
DR   InterPro; IPR014722; Rib_uL2_dom2.
DR   InterPro; IPR041997; Ribosomal_eL6_KOW.
DR   InterPro; IPR005568; Ribosomal_uL6_N.
DR   InterPro; IPR008991; Translation_prot_SH3-like_sf.
DR   PANTHER; PTHR20583; TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR20583:SF1; TRIPLE QXXK/R MOTIF-CONTAINING PROTEIN; 1.
DR   Pfam; PF01159; Ribosomal_L6e; 1.
DR   Pfam; PF03868; Ribosomal_L6e_N; 1.
DR   SUPFAM; SSF50104; Translation proteins SH3-like domain; 1.
PE   2: Evidence at transcript level;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Isopeptide bond {ECO:0000256|ARBA:ARBA00022499};
KW   Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW   Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW   Ribonucleoprotein {ECO:0000313|EMBL:ACH70868.1,
KW   ECO:0000313|RefSeq:NP_001135169.1};
KW   Ribosomal protein {ECO:0000313|EMBL:ACH70868.1,
KW   ECO:0000313|RefSeq:NP_001135169.1};
KW   Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT   DOMAIN          8..66
FT                   /note="Large ribosomal subunit protein uL6 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03868"
SQ   SEQUENCE   259 AA;  29621 MW;  F3563703470647EB CRC64;
     MAEGDKKKVA KKAHCSRNPV LARGIGRYSR SAMYARRAMY KRKTKTTETK IEKKMKVKTP
     STITKTVGGD KNGGTRVVKM RKMPRYYPTE DVPRKLKNHG KKPFSQHKRN LRATITPGTV
     LVLLTGRHRG KRVVFLKQLS SGLLLVTGPL ALNRVPLRRA HQKFVIATAT KVDISGMKIP
     KTLSDAYFKK KRLRRPRHQE GEIFDTEKEK YQLTVQRKED QKAVDSQLLP LIKKVPQLKG
     YLRSSFCLSN GVYPHKLVF
//
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