ID B5YJR5_THEYD Unreviewed; 361 AA.
AC B5YJR5;
DT 25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT 25-NOV-2008, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=CRISPR system Cms protein Csm5 {ECO:0000256|ARBA:ARBA00016113};
DE AltName: Full=CRISPR type III A-associated protein Csm5 {ECO:0000256|ARBA:ARBA00031720};
GN Name=csm5_2 {ECO:0000313|EMBL:ACI21906.1};
GN OrderedLocusNames=THEYE_A0637 {ECO:0000313|EMBL:ACI21906.1};
OS Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87).
OC Bacteria; Nitrospirota; Thermodesulfovibrionia; Thermodesulfovibrionales;
OC Thermodesulfovibrionaceae; Thermodesulfovibrio.
OX NCBI_TaxID=289376 {ECO:0000313|EMBL:ACI21906.1, ECO:0000313|Proteomes:UP000000718};
RN [1] {ECO:0000313|Proteomes:UP000000718}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51303 / DSM 11347 / YP87
RC {ECO:0000313|Proteomes:UP000000718};
RA Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.;
RT "The complete genome sequence of Thermodesulfovibrio yellowstonii strain
RT ATCC 51303 / DSM 11347 / YP87.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACI21906.1, ECO:0000313|Proteomes:UP000000718}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51303 / DSM 11347 / YP87
RC {ECO:0000313|Proteomes:UP000000718};
RX PubMed=25635016;
RA Bhatnagar S., Badger J.H., Madupu R., Khouri H.M., O'Connor E.M.,
RA Robb F.T., Ward N.L., Eisen J.A.;
RT "Genome Sequence of the Sulfate-Reducing Thermophilic Bacterium
RT Thermodesulfovibrio yellowstonii Strain DSM 11347T (Phylum Nitrospirae).";
RL Genome Announc. 3:0-0(2015).
CC -!- FUNCTION: This subunit might be involved in maturation of a crRNA
CC intermediate to its mature form. {ECO:0000256|ARBA:ARBA00003088}.
CC -!- SIMILARITY: Belongs to the CRISPR-associated Csm5 family.
CC {ECO:0000256|ARBA:ARBA00006680}.
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DR EMBL; CP001147; ACI21906.1; -; Genomic_DNA.
DR RefSeq; WP_012546605.1; NC_011296.1.
DR RefSeq; YP_002248480.1; NC_011296.1.
DR AlphaFoldDB; B5YJR5; -.
DR STRING; 289376.THEYE_A0637; -.
DR EnsemblBacteria; ACI21906; ACI21906; THEYE_A0637.
DR KEGG; tye:THEYE_A0637; -.
DR PATRIC; fig|289376.4.peg.631; -.
DR eggNOG; COG1332; Bacteria.
DR HOGENOM; CLU_036878_2_0_0; -.
DR InParanoid; B5YJR5; -.
DR OrthoDB; 24360at2; -.
DR Proteomes; UP000000718; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0051607; P:defense response to virus; IEA:UniProtKB-KW.
DR InterPro; IPR010173; CRISPR-assoc_Csm5.
DR InterPro; IPR005537; RAMP_III_fam.
DR NCBIfam; TIGR01899; cas_TM1807_csm5; 1.
DR PANTHER; PTHR38007; CRISPR SYSTEM CMS PROTEIN CSM5; 1.
DR PANTHER; PTHR38007:SF1; CRISPR SYSTEM CMS PROTEIN CSM5; 1.
DR Pfam; PF03787; RAMPs; 1.
PE 3: Inferred from homology;
KW Antiviral defense {ECO:0000256|ARBA:ARBA00023118};
KW Reference proteome {ECO:0000313|Proteomes:UP000000718};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
SQ SEQUENCE 361 AA; 41708 MW; A132573F4A92923A CRC64;
MIYNVKLHTV SPIHIGCDQS YTPVNFVIDT DKSTLIEFDL WDFINSLDEK EYIKLRDISE
NKSPIALVYL YRFYAERKNR IKGRTIPIPK ELADRYRDVK QFQNESDVIR EFNEFEIPKT
FYNPYTGKPL IPGSSLKGSI RTAYIEGLIK EEGNVAHYRD REKYPKYTDI EEKILQGKTK
TDPFRLLKLS DFEPQGEVKT EIIFQVNVRK LNNTSKESLS IPIEIIPTGN VFKGTLAIEE
PLAHSGISKK LDLTELLLKT HSHYAGIFNK EIDLRKIKGF SLPNLSEYRE MFKQKYFLLR
LGKHSGAEAV TWEGLRKIKV KTKEGTQIMD SSTTIWLASK QKKPSNLSST TPFGWAILEV
L
//
