ID B6THD9_MAIZE Unreviewed; 312 AA.
AC B6THD9;
DT 16-DEC-2008, integrated into UniProtKB/TrEMBL.
DT 16-DEC-2008, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE RecName: Full=Transcription initiation factor IIB {ECO:0000256|ARBA:ARBA00013932};
DE AltName: Full=General transcription factor TFIIB {ECO:0000256|ARBA:ARBA00031706};
GN Name=100283348 {ECO:0000313|EnsemblPlants:Zm00001eb103570_P001};
GN ORFNames=ZEAMMB73_Zm00001d006220 {ECO:0000313|EMBL:ONM23118.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACG36522.1};
RN [1] {ECO:0000313|EMBL:ACG36522.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18937034; DOI=10.1007/s11103-008-9415-4;
RA Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E., Tatarinova T.V.,
RA Zhang H., Swaller T.J., Lu Y.P., Bouck J., Flavell R.B., Feldmann K.A.;
RT "Insights into corn genes derived from large-scale cDNA sequencing.";
RL Plant Mol. Biol. 69:179-194(2009).
RN [2] {ECO:0000313|EMBL:ONM23118.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb103570_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM23118.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001eb103570_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb103570_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
CC -!- SIMILARITY: Belongs to the TFIIB family.
CC {ECO:0000256|ARBA:ARBA00010857}.
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DR EMBL; EU964404; ACG36522.1; -; mRNA.
DR EMBL; CM007648; ONM23118.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM23120.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM23122.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM23123.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM23126.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM23128.1; -; Genomic_DNA.
DR EMBL; CM007648; ONM23129.1; -; Genomic_DNA.
DR RefSeq; NP_001149721.1; NM_001156249.1.
DR AlphaFoldDB; B6THD9; -.
DR EnsemblPlants; Zm00001eb103570_T001; Zm00001eb103570_P001; Zm00001eb103570.
DR GeneID; 100283348; -.
DR Gramene; Zm00001eb103570_T001; Zm00001eb103570_P001; Zm00001eb103570.
DR KEGG; zma:100283348; -.
DR HOGENOM; CLU_043736_1_1_1; -.
DR OMA; CKRPTEV; -.
DR OrthoDB; 38673at2759; -.
DR Proteomes; UP000007305; Chromosome 2.
DR ExpressionAtlas; B6THD9; baseline and differential.
DR GO; GO:0017025; F:TBP-class protein binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR GO; GO:0070897; P:transcription preinitiation complex assembly; IEA:InterPro.
DR CDD; cd20551; CYCLIN_TFIIB_rpt1; 1.
DR Gene3D; 1.10.472.170; -; 1.
DR Gene3D; 1.10.472.10; Cyclin-like; 1.
DR InterPro; IPR013763; Cyclin-like_dom.
DR InterPro; IPR036915; Cyclin-like_sf.
DR InterPro; IPR000812; TFIIB.
DR InterPro; IPR023486; TFIIB_CS.
DR InterPro; IPR013150; TFIIB_cyclin.
DR InterPro; IPR013137; Znf_TFIIB.
DR PANTHER; PTHR11618:SF13; TRANSCRIPTION INITIATION FACTOR IIB; 1.
DR PANTHER; PTHR11618; TRANSCRIPTION INITIATION FACTOR IIB-RELATED; 1.
DR Pfam; PF08271; TF_Zn_Ribbon; 1.
DR Pfam; PF00382; TFIIB; 2.
DR PRINTS; PR00685; TIFACTORIIB.
DR SMART; SM00385; CYCLIN; 2.
DR SUPFAM; SSF47954; Cyclin-like; 2.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
DR PROSITE; PS00782; TFIIB; 1.
DR PROSITE; PS51134; ZF_TFIIB; 1.
PE 1: Evidence at protein level;
KW Initiation factor {ECO:0000313|EMBL:ACG36522.1};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00469};
KW Protein biosynthesis {ECO:0000313|EMBL:ACG36522.1};
KW Proteomics identification {ECO:0007829|PeptideAtlas:B6THD9};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00469};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00469}.
FT DOMAIN 2..34
FT /note="TFIIB-type"
FT /evidence="ECO:0000259|PROSITE:PS51134"
SQ SEQUENCE 312 AA; 34298 MW; B430C08D02D1348E CRC64;
MSDSYCPDCK KHTEVAFDHS AGDTVCTECG LVLEAHSVDE TSEWRTFANE SNDNDPVRVG
GPSNPLLTDG GLSTVIAKPN GAQGDFLSSS LGRWQNRGSN PDRSLILAFR TIANMADRLG
LVATIKDRAN EIFKKIEDLK SIRGRNQDAI LAACLYIACR QEDRPRTVKE ICSVANGATK
KEIGRAKEFI VKQLEVEMGQ SMEMGTIHAG DFLRRFCSTL GMTNQAVNAA KEAVQRSEEL
DIRRSPISIA AAVIYMITQL SEDKKPLKDI SLATGVAEGT IRNSYKDLYP YASRLIPNTY
AKEEDLKNLC TP
//
