ID B6UCY8_MAIZE Unreviewed; 609 AA.
AC B6UCY8; A0A3L6F0P5;
DT 16-DEC-2008, integrated into UniProtKB/TrEMBL.
DT 16-DEC-2008, sequence version 1.
DT 24-JAN-2024, entry version 92.
DE SubName: Full=Pre-mRNA-splicing factor prp45 {ECO:0000313|EMBL:ACG47221.1};
GN Name=100286002 {ECO:0000313|EnsemblPlants:Zm00001eb193840_P001};
GN ORFNames=ZEAMMB73_Zm00001d052186 {ECO:0000313|EMBL:AQK56404.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ACG47221.1};
RN [1] {ECO:0000313|EMBL:ACG47221.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18937034; DOI=10.1007/s11103-008-9415-4;
RA Alexandrov N.N., Brover V.V., Freidin S., Troukhan M.E., Tatarinova T.V.,
RA Zhang H., Swaller T.J., Lu Y.P., Bouck J., Flavell R.B., Feldmann K.A.;
RT "Insights into corn genes derived from large-scale cDNA sequencing.";
RL Plant Mol. Biol. 69:179-194(2009).
RN [2] {ECO:0000313|EnsemblPlants:Zm00001eb193840_P001, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb193840_P001,
RC ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [3] {ECO:0000313|EMBL:AQK56404.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK56404.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EnsemblPlants:Zm00001eb193840_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb193840_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SNW family. {ECO:0000256|ARBA:ARBA00010197}.
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DR EMBL; EU975103; ACG47221.1; -; mRNA.
DR EMBL; CM000780; AQK56404.1; -; Genomic_DNA.
DR RefSeq; NP_001152362.1; NM_001158890.1.
DR AlphaFoldDB; B6UCY8; -.
DR SMR; B6UCY8; -.
DR IntAct; B6UCY8; 7.
DR STRING; 4577.B6UCY8; -.
DR iPTMnet; B6UCY8; -.
DR PaxDb; 4577-GRMZM2G478709_P01; -.
DR EnsemblPlants; Zm00001eb193840_T001; Zm00001eb193840_P001; Zm00001eb193840.
DR EnsemblPlants; Zm00001eb193840_T003; Zm00001eb193840_P003; Zm00001eb193840.
DR GeneID; 100286002; -.
DR Gramene; Zm00001eb193840_T001; Zm00001eb193840_P001; Zm00001eb193840.
DR Gramene; Zm00001eb193840_T003; Zm00001eb193840_P003; Zm00001eb193840.
DR KEGG; zma:100286002; -.
DR eggNOG; KOG2441; Eukaryota.
DR HOGENOM; CLU_006601_2_1_1; -.
DR InParanoid; B6UCY8; -.
DR OMA; YGQRRGW; -.
DR OrthoDB; 5490078at2759; -.
DR Proteomes; UP000007305; Chromosome 4.
DR ExpressionAtlas; B6UCY8; baseline and differential.
DR GO; GO:0005681; C:spliceosomal complex; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR InterPro; IPR017862; SKI-int_prot_SKIP.
DR InterPro; IPR004015; SKI-int_prot_SKIP_SNW-dom.
DR PANTHER; PTHR12096; NUCLEAR PROTEIN SKIP-RELATED; 1.
DR PANTHER; PTHR12096:SF0; SNW DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF02731; SKIP_SNW; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:B6UCY8};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305}.
FT DOMAIN 188..347
FT /note="SKI-interacting protein SKIP SNW"
FT /evidence="ECO:0000259|Pfam:PF02731"
FT REGION 38..74
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 137..156
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 222..253
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 329..437
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 523..559
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 576..609
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 369..437
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 523..556
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 595..609
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 609 AA; 67880 MW; 904CC6C2B117EA42 CRC64;
MATLKDLLPA PKTSASTFYD HSSDPWFKER YGGESAQAAA ATRPAAAARP VPPYGKRTGF
VPRRPEDFGD GGAFPEIHVA QYPLGMGRRD DKGGSKILAL TVDAHGSVAF DAVVKQGENA
GKIVYSKHSD LVPKIATADS QATSDDDEEQ KQIEETTERT KAALEKVVNV RLSAAQPKNV
PTHDSESKFI KYKPSQQSAA FNSGAKERII RMSEMAVDPL EPPKFKHKRV PRASGSPPVP
VMHSPPRPVT VKDQQDWKIP PCISNWKNPK GYTIPLDKRL AADGRGLQEV QINDNFAKLS
EALYVAEQKA REAVQMRSKV QRELMLKEKE RKEQELRALA QRARMERTGA PPAPSGVPAG
GGRGAIQDVD EVMDMEQPRE PRESREQRRE SREEREGRIE RDRIREERRR ERERERRLEA
KDAAMGKKSK ITRDRDRDIS EKIALGMAST GGAKGGEVMY DQRLFNQDKG MDSGFATDDQ
YNIYSKGLFT AQSTMSTLYR PKKDGDSDVY GDADEQLEKV MKTERFKPDK GFTGASERTG
KRDRPVEFDK QEENDPFGLD QFLTEVKKGK KAVEKIGGGG TMKASGGSSM RDDYDGGSGR
SRINFERGR
//
