ID B7FQW5_PHATC Unreviewed; 666 AA.
AC B7FQW5;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 08-NOV-2023, entry version 36.
DE RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN ORFNames=PHATRDRAFT_32339 {ECO:0000313|EMBL:EEC51402.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC51402.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC51402.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC51402.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000605; EEC51402.1; -; Genomic_DNA.
DR RefSeq; XP_002176939.1; XM_002176903.1.
DR AlphaFoldDB; B7FQW5; -.
DR PaxDb; 2850-Phatr32339; -.
DR GeneID; 7196925; -.
DR KEGG; pti:PHATRDRAFT_32339; -.
DR eggNOG; ENOG502SC27; Eukaryota.
DR InParanoid; B7FQW5; -.
DR OrthoDB; 410783at2759; -.
DR Proteomes; UP000000759; Chromosome 1.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR InterPro; IPR007527; Znf_SWIM.
DR Pfam; PF04434; SWIM; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Reference proteome {ECO:0000313|Proteomes:UP000000759};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT DOMAIN 493..531
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
SQ SEQUENCE 666 AA; 75664 MW; 2B7B734EDE311BDD CRC64;
MEPHEVKKSI AYINGHEVQI TLDAAKSSAP PSVIGKMLHL QTGNILSDSS LQHIRIQSGK
EQETVLLKDE EFMTQADKLL SYLENTPEIS FCAIYDDPDS PLFTVYKQRA KKDRRCLPTS
IRVNSGVSAE TGILDNATLD AMDPNGELDD YVDRTRRAFK LLGSQKMLLG VAWTNNESRN
VFSRFSEIMV ADVTEGTNNA KRPLFLFSGK TRLVGPSIGC GLDAYRNYSQ NGDPKEYGTF
VDAIPTFYPL CEHKLCHWHL LYRSNLMKVQ TGKCGVKATI LFRVVVLWIE SWMTKIETQE
EYELSKRLLA DWLATPEAID VKLGGMGQTI VSQINAYMTL SLFPHEQRWA RYRYLYTRAF
NTSASSYAEA ENSALKRRGD GVRPSFSVPK ATQVINEGTQ IRSKKRHQKA VYNLNAAKTR
KPAYYANIGD LVDYIQDSLS KDFEAAASFV LFRPNADQFW VKQATRKSKN TDIRKINDSS
YYKYMIPQFE RTRIVELVNI DGTFYLVCSC GKFQRQASPC AHLYKVLGQS PTSTDVSVRW
TKHWDVYLHR SGHSDLSKHL EDLYKQERPG PVFVDSGQWV IGKGSDNGKC IFYKKNVWLK
CFCAQFHFYQ EMSKLAGFDM EAAESMNKAM QEALEKVQAN VAKRAGKMDY TIGPAITKDH
AFFNSL
//
