ID B7G1Z1_PHATC Unreviewed; 453 AA.
AC B7G1Z1;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 08-NOV-2023, entry version 45.
DE RecName: Full=Copine {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=PHATRDRAFT_13587 {ECO:0000313|EMBL:EEC47209.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC47209.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC47209.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC47209.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the copine family.
CC {ECO:0000256|ARBA:ARBA00009048}.
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DR EMBL; CM000614; EEC47209.1; -; Genomic_DNA.
DR RefSeq; XP_002181286.1; XM_002181250.1.
DR AlphaFoldDB; B7G1Z1; -.
DR PaxDb; 2850-Phatr13587; -.
DR GeneID; 7202075; -.
DR KEGG; pti:PHATRDRAFT_13587; -.
DR eggNOG; KOG1327; Eukaryota.
DR InParanoid; B7G1Z1; -.
DR OrthoDB; 2874415at2759; -.
DR Proteomes; UP000000759; Chromosome 12.
DR GO; GO:0005544; F:calcium-dependent phospholipid binding; IEA:InterPro.
DR CDD; cd04047; C2B_Copine; 1.
DR Gene3D; 2.60.40.150; C2 domain; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR InterPro; IPR000008; C2_dom.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR037768; C2B_Copine.
DR InterPro; IPR045052; Copine.
DR InterPro; IPR010734; Copine_C.
DR InterPro; IPR002035; VWF_A.
DR InterPro; IPR036465; vWFA_dom_sf.
DR PANTHER; PTHR10857; COPINE; 1.
DR PANTHER; PTHR10857:SF106; GON-2 EXTRAGENIC MODIFIER; 1.
DR Pfam; PF00168; C2; 2.
DR Pfam; PF07002; Copine; 1.
DR SMART; SM00239; C2; 1.
DR SMART; SM00327; VWA; 1.
DR SUPFAM; SSF49562; C2 domain (Calcium/lipid-binding domain, CaLB); 2.
DR SUPFAM; SSF53300; vWA-like; 1.
DR PROSITE; PS50004; C2; 1.
DR PROSITE; PS50234; VWFA; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000759}.
FT DOMAIN 64..190
FT /note="C2"
FT /evidence="ECO:0000259|PROSITE:PS50004"
FT DOMAIN 222..437
FT /note="VWFA"
FT /evidence="ECO:0000259|PROSITE:PS50234"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EEC47209.1"
FT NON_TER 453
FT /evidence="ECO:0000313|EMBL:EEC47209.1"
SQ SEQUENCE 453 AA; 48884 MW; F4CCEFEA6ACC5A1E CRC64;
KNSLSPHWVK VFEIDYELGT PSKVAVNIFD EVRKGENKGI GSAVFDIGEL LGARGNTKAR
KLKKGGTLFA TVRKSQGSGM LRLQVKGTKL KNVEGMFSKS DPFFELSRKV DAAGSLTWDN
VYRSKDIHNN LNPEWETAII SLSTLCGGNL DLPILLSVFD HESSGKHKPM GQLETSVNGL
KQAAETRNSL QLQRKGKDVG AITVVKAEAN FVDYVSGGCE INVVVAIDFT GSNGDPRKPG
TLHYLHPDGR KNDYEKAISA IVGILSKYDS DQKFPVVGFG AKYGGVVRHC FQCGPHEESH
GVAGVLDAYK QVFKSGLVMS GPTVFTEVIE TAAARAMSSQ SEAQRKGQQS YTVLLILTDG
AVSDVQATAH SLNQVSHAPL SVVIVGLGDA DFSSMQFLDD SSKPGKRDIA QFVQFNRHAS
NSVALTSETL HEIPEQLTGY FSSNGISPLP PIQ
//