ID B7K2J6_RIPO1 Unreviewed; 1016 AA.
AC B7K2J6;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:ACK66389.1};
GN OrderedLocusNames=PCC8801_2378 {ECO:0000313|EMBL:ACK66389.1};
OS Rippkaea orientalis (strain PCC 8801 / RF-1) (Cyanothece sp. (strain PCC
OS 8801)).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Oscillatoriophycideae;
OC Chroococcales; Aphanothecaceae; Rippkaea; Rippkaea orientalis.
OX NCBI_TaxID=41431 {ECO:0000313|EMBL:ACK66389.1, ECO:0000313|Proteomes:UP000008204};
RN [1] {ECO:0000313|Proteomes:UP000008204}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PCC 8801 {ECO:0000313|Proteomes:UP000008204};
RX PubMed=21972240; DOI=10.1128/mBio.00214-11;
RA Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H.,
RA Sherman L.A., Pakrasi H.B.;
RT "Novel metabolic attributes of the genus Cyanothece, comprising a group of
RT unicellular nitrogen-fixing Cyanobacteria.";
RL MBio 2:E214-E214(2011).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton
CC {ECO:0000256|ARBA:ARBA00004245}.
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DR EMBL; CP001287; ACK66389.1; -; Genomic_DNA.
DR RefSeq; WP_012595657.1; NC_011726.1.
DR AlphaFoldDB; B7K2J6; -.
DR STRING; 41431.PCC8801_2378; -.
DR KEGG; cyp:PCC8801_2378; -.
DR eggNOG; COG2319; Bacteria.
DR HOGENOM; CLU_002676_0_0_3; -.
DR OrthoDB; 426503at2; -.
DR Proteomes; UP000008204; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd00200; WD40; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 5.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR44129:SF1; PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE IB SUBUNIT BETA; 1.
DR PANTHER; PTHR44129; WD REPEAT-CONTAINING PROTEIN POP1; 1.
DR Pfam; PF13676; TIR_2; 1.
DR Pfam; PF00400; WD40; 13.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00255; TIR; 1.
DR SMART; SM00320; WD40; 14.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS50104; TIR; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 5.
DR PROSITE; PS50082; WD_REPEATS_2; 12.
DR PROSITE; PS50294; WD_REPEATS_REGION; 9.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008204};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT TRANSMEM 208..227
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 6..137
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
FT REPEAT 316..348
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 355..389
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 418..439
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 446..487
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 487..519
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 528..560
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 610..651
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 667..701
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 707..748
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 769..803
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 810..842
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 857..898
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 986..1016
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1016 AA; 115031 MW; D420F21EB81CB227 CRC64;
MTNNSSKSSV FISYSRRDKT FVQKLHHALN EGKRDIWVDW EDIAPTEDWR EAIAQGIQSA
DNFLFIISPD SVKSIECNKE IDHAIKCNKR LVPILYREVE DNSVRPELAK HNYIFFQNEE
SFFENLEKLE QALDTDLAYI KEHTYLLSRA ILWQQKQRDP SYLLQGTALK EAQEWITHSL
NQTPRPTQLH NDYIITSIQK SKQFLRRIAI VVGALGLIAF ASFLVALSER NQAKEAELKA
KSEEVKALTG WAQARLLRHE QLDALINIIR AVDKLKDLPQ SSSEETFSDF AQIPIHDQVE
QTLRQVVYTL QELNHLQADQ KTIYDVQFSP DHRWIASASA DTKVNLWKNN QRQTSLLHQG
VVWRIGFSPD SQMMVSASED KTVKLWQLNP QGNWTLKQTL IHPVPVRSVT FTFTDQCSQT
GQKIASAGTD GLIRIWNLEG KLQRTFQAHT GTINDLKISP NCQTLASASE DRTAKLWTLD
GQKKATLLGH ENQVWTINFS PDGQRIVTGS FDTTIKLWDQ TGQLLKTLEG HANWVMSVIF
SRNSQEIVSG GEDAMLKFWS REGDLFASLL SPHGDIGSIN ISADNQYLVF TGDSGKMSLW
QQGGSVIEIL RGHTSGVTGV HFSPDGQLMA SVSNDQTVKL WQFDPQAKRM ELQQTLEYRK
GEPEGGLKNV NFTPDGQYLI TTSYDNTLQS WNVKKALTHS SIQGEIIAKN NTVVNRFRIS
SDGKRLALAS ADGTIKLWDL KSQKLLKILT TNQSPSLTNN GINQCQKIQQ GYPPQSTDVA
FSKNNQYLVA SYSDGCLKLW NLEGQLIQEF RGHPQWINAL RFSPDGQLLA TTSRDNTIKL
WQWEKTQFKI DQPTKILKGH QDWVWNVAFT SDGKKLASGG KDNTVKLWNI TTQSPSDQSD
LIVTLQSHID WVTSVDFSPC NQDNKDYPNC HQRLQLASAS ADQTIIFWKM EEVLRIETKD
NHETALQSLF KKGCQWLSVY LETNPDTPEA SDIRSACGET KPPSDQPGNK ILSPDQ
//
