ID B7Q5C0_IXOSC Unreviewed; 1299 AA.
AC B7Q5C0;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 24-JAN-2024, entry version 72.
DE RecName: Full=U1-type domain-containing protein {ECO:0000259|SMART:SM00451};
GN ORFNames=IscW_ISCW021833 {ECO:0000313|EMBL:EEC14042.1};
OS Ixodes scapularis (Black-legged tick) (Deer tick).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari;
OC Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes.
OX NCBI_TaxID=6945;
RN [1] {ECO:0000313|EMBL:EEC14042.1, ECO:0000313|Proteomes:UP000001555}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Wikel {ECO:0000313|Proteomes:UP000001555}, and Wikel colony
RC {ECO:0000313|EMBL:EEC14042.1};
RG Ixodes scapularis Genome Project Consortium;
RA Caler E., Hannick L.I., Bidwell S., Joardar V., Thiagarajan M., Amedeo P.,
RA Galinsky K.J., Schobel S., Inman J., Hostetler J., Miller J., Hammond M.,
RA Megy K., Lawson D., Kodira C., Sutton G., Meyer J., Hill C.A., Birren B.,
RA Nene V., Collins F., Alarcon-Chaidez F., Wikel S., Strausberg R.;
RT "Annotation of Ixodes scapularis.";
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblMetazoa:ISCW021833-PA}
RP IDENTIFICATION.
RC STRAIN=wikel {ECO:0000313|EnsemblMetazoa:ISCW021833-PA};
RG EnsemblMetazoa;
RL Submitted (MAY-2020) to UniProtKB.
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DR EMBL; ABJB010272088; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; ABJB010761277; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; ABJB010933196; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; ABJB010974431; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; ABJB010986287; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; DS860684; EEC14042.1; -; Genomic_DNA.
DR RefSeq; XP_002411728.1; XM_002411683.1.
DR STRING; 6945.B7Q5C0; -.
DR PaxDb; 6945-B7Q5C0; -.
DR EnsemblMetazoa; ISCW021833-RA; ISCW021833-PA; ISCW021833.
DR KEGG; isc:IscW_ISCW021833; -.
DR VEuPathDB; VectorBase:ISCI021833; -.
DR VEuPathDB; VectorBase:ISCP_033727; -.
DR VEuPathDB; VectorBase:ISCW021833; -.
DR HOGENOM; CLU_005178_0_0_1; -.
DR InParanoid; B7Q5C0; -.
DR OMA; MYPRCAM; -.
DR Proteomes; UP000001555; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR032446; SCAPER_N.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR31434; S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM; 1.
DR PANTHER; PTHR31434:SF2; S PHASE CYCLIN A-ASSOCIATED PROTEIN IN THE ENDOPLASMIC RETICULUM; 1.
DR Pfam; PF16501; SCAPER_N; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
PE 1: Evidence at protein level;
KW Proteomics identification {ECO:0007829|PeptideAtlas:B7Q5C0};
KW Reference proteome {ECO:0000313|Proteomes:UP000001555}.
FT DOMAIN 743..777
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 180..396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 480..519
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 602..622
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 180..199
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..236
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 357..396
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1299 AA; 144022 MW; 7EFDC1776FF95FED CRC64;
MGTPPNAAAR GGAKLRARSS SAGRGPDKGL RARYWAYLFE NLQRAVDEIY HTCETDESTL
ECKEAILILE NYRKEFTALI NWIQLSKQLE STPPPNRPTC LTWEVRKPSL GKPVPRNFMA
PRPGLAQRPS RLTVGTQCGP ESIPAAAAPC TVSAASSVQS LEHQDASGAD CVLKVVPETG
KSISSSDSVS KTTDMSKPPE VSKTLERSKT PEPSKASEAP KPQKTDDSEG WETVCRNKTR
SRNSPPKKFA PRHPTAPNSH HPSEPPRGGV ARSPSAPAIA VAPASSVRPK TRRSSAPLSS
GPPVVAKNPR PRNVAARDHV GPRSATSMPS LALRREPKKN GFAAPPTPTL GSKSKSFVGS
DERERSRRRG EQGRRDRPQS QRASRESLRS LKAAEEEEAE AIDRMVLSRI ASPLEDARTD
PQEAVADTVV SPFEDDGVDV DDSEAFEAEE LVYEMGLSWG EQMDCLEDLE LRTPGRALQM
HEKLSSASRK RPLSETLQRH QEKQAKAQEQ RERIREEKAQ RCRDLSKKVE EKKAQQEELQ
LQRRQILEKR LQRAAEKREM QLKNKVKRAH DEEEKVNEIA FINTLEAQNK RIDLMSKEKD
HEARLQDIQG ERQRKLEEKA AKEAAAEERR KVLEAERQAK LLEIKEKRKL KDEKVQQQQQ
EKEKLRQSLL KQKEREREQR LTALNAAQLA TTEELQKKIQ LKQEESARRH EENMEQIRLK
AFELSVRKCS SNDDAAPRHV PYETKKICSL CNVLIGSEVY LLSHLRGKKH QEAIRENYDG
EAPSAEELES YNLKHIVDAS ADQLDPSIAL DRERQKAHRK RCKKLRHKMS ARGRLYEKAF
AERPKAVESK NKMRLAKALK EIGRCLGGQG QGPWDGALVS GLDRALGELE RALVVGGAAD
ADALCHLGGF SSLMELLGCI LKATAELPTV VPSRCLVRAC VVLRIACEKS DASCSYLVLS
NRVGVLLDIL THRLNLSVPD EWGSSPGSGR AVPSLEPGQD PVATALLNLL RATLRGVTNA
DSEVQTSDDN HQRLLDVISY AVSMGTVDKL AQCLGKVRAP LDSESPQLTE FLVQAMEFVA
CLARLVAASR HRRQKEEDPT QLAATFGVTQ LAGSVSLLYG TLLQMGAPSG SRAAGQEPPA
LPPGRLTVTA AALDLLNQMG QLDLPMFQAV LGAEGMSLQL RHIASYLLWY CSHWEEWPLL
HQVVLLVGHF AVLSPDNQAV IQSGEQPTLL QLLCTLPFEY FSDPQLTQVL FPTLVSCCFG
NEHNRAVLEQ ELSPVLLANY VEVSRGPSVQ ILDLGMVFG
//
