ID B8ALN3_ORYSI Unreviewed; 963 AA.
AC B8ALN3;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE RecName: Full=DNA 3'-5' helicase {ECO:0000256|ARBA:ARBA00034808};
DE EC=5.6.2.4 {ECO:0000256|ARBA:ARBA00034808};
GN ORFNames=OsI_12457 {ECO:0000313|EMBL:EEC75666.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC75666.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC75666.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=5.6.2.4;
CC Evidence={ECO:0000256|ARBA:ARBA00034618};
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00560}.
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DR EMBL; CM000128; EEC75666.1; -; Genomic_DNA.
DR AlphaFoldDB; B8ALN3; -.
DR STRING; 39946.B8ALN3; -.
DR EnsemblPlants; BGIOSGA013055-TA; BGIOSGA013055-PA; BGIOSGA013055.
DR Gramene; BGIOSGA013055-TA; BGIOSGA013055-PA; BGIOSGA013055.
DR HOGENOM; CLU_001114_6_0_1; -.
DR Proteomes; UP000007015; Chromosome 3.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0008854; F:exodeoxyribonuclease V activity; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd22352; RecB_C-like; 1.
DR CDD; cd18807; SF1_C_UvrD; 1.
DR Gene3D; 3.90.320.10; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.10.3170.10; Recbcd, chain B, domain 2; 1.
DR HAMAP; MF_01485; RecB; 1.
DR InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011604; PDDEXK-like_dom_sf.
DR InterPro; IPR004586; RecB.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR014016; UvrD-like_ATP-bd.
DR NCBIfam; TIGR00609; recB; 1.
DR PANTHER; PTHR11070:SF23; RECBCD ENZYME SUBUNIT RECB; 1.
DR PANTHER; PTHR11070; UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER; 1.
DR Pfam; PF00580; UvrD-helicase; 1.
DR Pfam; PF13361; UvrD_C; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF52980; Restriction endonuclease-like; 1.
DR PROSITE; PS51198; UVRD_HELICASE_ATP_BIND; 1.
DR PROSITE; PS51217; UVRD_HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU00560}; DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Helicase {ECO:0000256|PROSITE-ProRule:PRU00560};
KW Hydrolase {ECO:0000256|PROSITE-ProRule:PRU00560};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU00560}; Reference proteome {ECO:0000313|Proteomes:UP000007015}.
FT DOMAIN 1..230
FT /note="UvrD-like helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51198"
FT DOMAIN 260..526
FT /note="UvrD-like helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51217"
SQ SEQUENCE 963 AA; 108833 MW; 210A0DB42AA21BE4 CRC64;
MRHEQIVARI DAIKAQWRAA AGDLEALIAQ SGVDKRSYSS KHLPNWLNKV GEWSGQETQD
YQLPKELDKF RQSVLLEKTK KGEPPRHALF TAIDELFDEP LTLRDLIMAR ALSEIRTSIQ
QEKRQRAELG FDDLLSRLDS ALQSGGGEQL AQAIRQRYPV AMIDEFQDTD PQQYRIFQKL
YVGRPDCGLL LIGDPKQAIY AFRGADIFTY MRARSEVSAH YTLETNWRSS PSMVASVNHL
FSQVEKPFLF GQIPFIEVNA AEKNQGLAFE LHGKPQPAMQ FWLQQGEGAG VSGYQQLMAR
LCATQIRDWL SAGQQGLARL QSGKASRPVQ ASDITVLVRS RNEAALVRDA LSALSIPSVY
LSNRDSVFDT PEAKDLLWLL QAVLAPEQER TLRSAMATGL MGLDAPTLDG LSRDERAWDA
LVNEFDNYRT LWLRRGVLPM LSEVMKARHL AENLLASAGG ERRLTDVLHL GELLQEAAAQ
LDSEHALVRW LAQQIAQPNR QSDNQQLRLE SDRHLVQVIT IHKSKGLEFD LVWLPFVGNF
RQQQQALYHD RHSFQALLDL DADEESQAWA EEERLAEDLR LLYVALTRSV YHCSIGIAPL
FQGTRKKQGD TDLHRSALGY LVQGGQPGDA VYLQERLQQL VGGGIALSLV EPPDAEPWQP
QASLAEALAA KSFTRRIQDF WRVTSYTGLQ QHGASLMQDL LPRLDVDAAG ERGEESEPAL
TPHTFPRGAT PGTFLHSLFE TLDFTQPLDE QWLLEQLQQQ GFAEHWQPIL LAWMQVLLNT
PLDDSGVTLA ALTPQHKQAE LQFYLPINRL LQAKELDALV KRYDPLSARC PALDFHQVQG
MLKGFIDLVF CWQGKYYLLD YKSNWLGEDS SAYTRPAMEQ AMAEHRYDLQ YQLYTLALHR
YLRHRLPDYD YRRHFGGVIY LFLRGVDAAH PGNGIFTCLP AFELVAGMDS LFSGEAAATE
EKS
//