ID B8BJG9_ORYSI Unreviewed; 785 AA.
AC B8BJG9;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 77.
DE RecName: Full=SWI/SNF complex subunit SWI3C {ECO:0008006|Google:ProtNLM};
GN ORFNames=OsI_35371 {ECO:0000313|EMBL:EEC67805.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC67805.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC67805.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
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DR EMBL; CM000136; EEC67805.1; -; Genomic_DNA.
DR AlphaFoldDB; B8BJG9; -.
DR STRING; 39946.B8BJG9; -.
DR EnsemblPlants; BGIOSGA034932-TA; BGIOSGA034932-PA; BGIOSGA034932.
DR Gramene; BGIOSGA034932-TA; BGIOSGA034932-PA; BGIOSGA034932.
DR HOGENOM; CLU_004447_4_1_1; -.
DR OMA; NLMEGHG; -.
DR Proteomes; UP000007015; Chromosome 11.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR032451; SMARCC_C.
DR InterPro; IPR007526; SWIRM.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR000433; Znf_ZZ.
DR PANTHER; PTHR12802:SF41; BRAHMA ASSOCIATED PROTEIN 155 KDA; 1.
DR PANTHER; PTHR12802; SWI/SNF COMPLEX-RELATED; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR Pfam; PF04433; SWIRM; 1.
DR Pfam; PF16495; SWIRM-assoc_1; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
DR PROSITE; PS50934; SWIRM; 1.
DR PROSITE; PS50135; ZF_ZZ_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000007015};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00228}.
FT DOMAIN 184..283
FT /note="SWIRM"
FT /evidence="ECO:0000259|PROSITE:PS50934"
FT DOMAIN 354..408
FT /note="ZZ-type"
FT /evidence="ECO:0000259|PROSITE:PS50135"
FT DOMAIN 409..459
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 412..463
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 1..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 666..701
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 744..785
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 47..68
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 666..689
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 785 AA; 85298 MW; 17C296E31C1379DC CRC64;
MPRKASSTSD SRLKWRKRKR NPTASPSPSR RSSAAAAAAD HSDDSDSAAV NEDDDSAVPE
DADDETLAGA EDPVLDLREA EVLPSAEPVS AFPVATRRVV NRPHPSVLAV IAAERSACAG
EGSAAVAAAV LENISYGQQQ VLSGVLPDHA SLATDTDKPS TYVCTPPNLM EGHGVTKQFQ
GRLHVVPKHS DWFSPGIVHR LERQVVPQFF SGKSPGNTPE KYMLLRNKVI AKYLENPSKR
LAFAECQGLV ANTAELYDLS RIVRFLDTWG IINYLASGSV HRGLRMATSL LREEPTGELQ
LLTAPLKSID GLILFDRPKC SLQAEDISSL ASNSEVVHFD AGLAELDEKI RERLSESSCS
YCLQPLTSLH YQSLKEADIA LCSDCFHDAR YITGHSSLDF QRVDGDNNRS ENDGDSWTDQ
ETLLLLEGIE KYNDNWNNIA EHVGTKSKAQ CIYHFIRLPV EDGLLENIEV PDVFVPFRAE
TNGYPHSDCN GSTSGNLPQR IPPGNQLPFI NSSNPVMSLV GFLASAIGPR VAASCASAAL
SDLTIDDDSR VNSEGICSDA RGHGAHPNFR DHNGGVSSSI SPEKVKHAAM CGLSAAATKA
KLFADQEERE IQRLTATVIN HQLKRLELKL KQFAEVETLL LKECEQVERI RQRIASDRVR
IVSTRLASPG NSLPGGSTST MSSNPMSMSP RPMGVPGSMP QSSMPAPFAN NMQGHGHPQM
AFLQQQQQQR QQMLSFGPRL PLSAIQTQPS PQTSNIMFNP GMPNSVTPNH HQLLRSSSGN
NSSVG
//
