ID B8BRP9_THAPS Unreviewed; 908 AA.
AC B8BRP9;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 08-NOV-2023, entry version 68.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EED95997.1};
GN ORFNames=THAPSDRAFT_20959 {ECO:0000313|EMBL:EED95997.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED95997.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED95997.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED95997.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED95997.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED95997.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000638; EED95997.1; -; Genomic_DNA.
DR RefSeq; XP_002286356.1; XM_002286320.1.
DR AlphaFoldDB; B8BRP9; -.
DR PaxDb; 35128-Thaps20959; -.
DR EnsemblProtists; EED95997; EED95997; THAPSDRAFT_20959.
DR GeneID; 7445539; -.
DR KEGG; tps:THAPSDRAFT_20959; -.
DR eggNOG; ENOG502QYY2; Eukaryota.
DR HOGENOM; CLU_319944_0_0_1; -.
DR InParanoid; B8BRP9; -.
DR OMA; ATICFTP; -.
DR Proteomes; UP000001449; Chromosome 1.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR InterPro; IPR017884; SANT_dom.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SMART; SM00717; SANT; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS51294; HTH_MYB; 1.
DR PROSITE; PS50090; MYB_LIKE; 1.
DR PROSITE; PS51293; SANT; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 514..539
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 662..683
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 746..765
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 779..836
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 785..829
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 787..817
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 191..217
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 231..256
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 615..638
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 839..908
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 839..855
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 866..882
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 885..899
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 908 AA; 98358 MW; C91C29F74C44EDD9 CRC64;
MSCTPTSQSV ARSLSPSDES RFVPHSSIVD ASSVMENHFL SSSSNNQNEA KQAGVHGKDY
TIMKVGDNVR PTFAANRNQE PTLVADDDDD DNQSGIVGAT ICFTPETSPR ASPKQDAVIN
REVNPLIHHS EINTTSTDTD NYIGSVEANR KLGNSLMHVA SSLDDRSTTE YEIIDGTSSK
GTIEVEELDL ESDELEEDEG NVGDAVKGRA KAGSDRNASC NDMAAMLEMF DGDSPSSTLP
SLNSGSGGDI KDIPEVPNLS TDSLFKNLSS TSADEIAILK NLQPFSNEIN PPSSAQSGTS
FIITAKSMLG RVSNFEVDVA EEDVSATDDN AKESPKVDDT PLTPFKNLKS FWETQSTFTH
MTKSVVNRIL GREMPKVESV EEGQDATDFS IKTTPADASA GLPADLVRNS KYSGTADEAN
DSFISPPRAP CDTAAQVKQV GVPEMQFGDA LERKLGELEL ADPSDGTKLD TTVQLSGIVN
SPTLRVHEDG NASKTEDIAT NDTPARARLS NVKVILFSVI VTVASFLASV GVVLCLWAFH
LTSSLIATTK SLIVHVLNNH ALKNTAVISE AKDDVVDAEN DAEIESSRMN LSSLFSDEAP
AMQPGVELLR QLAKSSSDNS TTDVQQETEE GETAKQQEPV TKVPALLSEF NKMYARLHST
GAYAIALTSF LLVVMVHAFV HYVGLQQHKG YDAEYFASME HRCISTNTTS FPSVPVYQIN
LAPAVSVEEG ETIYGYTFSG LGLPKLAVIM SVVISFICAA STKPIKFKMP KSSRTVAPTS
TRLIGIWTAE EHLQFIIGFN KHGNKWKLVA EYIPSRTYVQ VRTHGSHWVK IGSPQVMNKS
RRITSPPYDT PKTSNKTKSV KIEHVKSEQV LSNANTTPRG KVRVNAKQAR SEHKPTTSKS
KNSSRRSM
//
