ID B8BSE8_THAPS Unreviewed; 545 AA.
AC B8BSE8;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
GN ORFNames=THAPSDRAFT_1960 {ECO:0000313|EMBL:EED96117.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED96117.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED96117.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED96117.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED96117.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED96117.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000638; EED96117.1; -; Genomic_DNA.
DR RefSeq; XP_002286476.1; XM_002286440.1.
DR AlphaFoldDB; B8BSE8; -.
DR PaxDb; 35128-Thaps1960; -.
DR EnsemblProtists; EED96117; EED96117; THAPSDRAFT_1960.
DR GeneID; 7452561; -.
DR KEGG; tps:THAPSDRAFT_1960; -.
DR HOGENOM; CLU_500144_0_0_1; -.
DR InParanoid; B8BSE8; -.
DR Proteomes; UP000001449; Chromosome 1.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0090158; P:endoplasmic reticulum membrane organization; IBA:GO_Central.
DR GO; GO:0061817; P:endoplasmic reticulum-plasma membrane tethering; IBA:GO_Central.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR Pfam; PF00635; Motile_Sperm; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT DOMAIN 18..160
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
FT REGION 392..438
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 392..413
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 545 AA; 60246 MW; EA6D0565AA944D5B CRC64;
MAASRSQPLL NDGTCNSFIS VSPSTLHFQL SSSIPTASEV SFSIHNSPSS CQHVAFKFTT
NRRNGYVTNP SLGILSPGAV ENVVLTLSDK AQLEILRSKC NANDKLRIEL YHVTSTFASV
FSRDGGLIRT EEERVTALKT VWNDISSGVK FDHRILRIVH SIAPNKNEVE KDLDGTTKQK
GNDQPLGNYA SVATTGELKS EQAVSSTTTN LQRAEEVIET KQTESQPRIG RTSLKSCLRN
NTVRSKSSDA IRLLADDNDD DKHVPLDASI LLASLRRTSI PFGDVQTSRP RGFRLSHTLS
SDALNQLPNH FCLDEMKAKE KYTRGHRDRE MIETKLDPNS LATRSEYEIA ITSPSHHAET
KHVLTDIIAP VEASGQYEHS VIIKSLVDDP GCNSDSDTNS LSSSDTSNSG CRRLPRMMRT
KLTTSPKQRS RSSDSDPGIH LLYEYDKLDS SIRSSTEATE SVRLGCKLLN EEMARQQNVV
CHKPVRSRSS NDMQVFTEEY TGMDNTVVSE GAVDNPGPLT DQVDLAQAMQ STFLLRIVVM
VRYVP
//
