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Database: UniProt
Entry: B8BXC6_THAPS
LinkDB: B8BXC6_THAPS
Original site: B8BXC6_THAPS 
ID   B8BXC6_THAPS            Unreviewed;       890 AA.
AC   B8BXC6;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 72.
DE   SubName: Full=Member of the clp superfamily, regulatory gamma subunit {ECO:0000313|EMBL:EED94182.1};
GN   Name=CLPC1 {ECO:0000313|EMBL:EED94182.1};
GN   ORFNames=THAPSDRAFT_268446 {ECO:0000313|EMBL:EED94182.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC   Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC   Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|EMBL:EED94182.1, ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED94182.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED94182.1};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA   Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA   Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA   Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA   Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA   Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA   Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA   Wilkerson F.P., Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT   metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED94182.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED94182.1};
RX   PubMed=18923393; DOI=10.1038/nature07410;
RA   Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA   Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA   Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA   Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA   Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA   Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA   Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA   La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA   Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA   Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA   Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA   Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA   Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA   Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "The Phaeodactylum genome reveals the evolutionary history of diatom
RT   genomes.";
RL   Nature 456:239-244(2008).
CC   -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC       {ECO:0000256|RuleBase:RU004432}.
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DR   EMBL; CM000640; EED94182.1; -; Genomic_DNA.
DR   RefSeq; XP_002288746.1; XM_002288710.1.
DR   AlphaFoldDB; B8BXC6; -.
DR   STRING; 35128.B8BXC6; -.
DR   PaxDb; 35128-Thaps268446; -.
DR   EnsemblProtists; EED94182; EED94182; THAPSDRAFT_268446.
DR   GeneID; 7444700; -.
DR   KEGG; tps:THAPSDRAFT_268446; -.
DR   eggNOG; KOG1051; Eukaryota.
DR   HOGENOM; CLU_005070_4_0_1; -.
DR   InParanoid; B8BXC6; -.
DR   OMA; MSEECIG; -.
DR   Proteomes; UP000001449; Chromosome 3.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR003959; ATPase_AAA_core.
DR   InterPro; IPR019489; Clp_ATPase_C.
DR   InterPro; IPR036628; Clp_N_dom_sf.
DR   InterPro; IPR004176; Clp_R_dom.
DR   InterPro; IPR001270; ClpA/B.
DR   InterPro; IPR018368; ClpA/B_CS1.
DR   InterPro; IPR028299; ClpA/B_CS2.
DR   InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR   PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 104; 1.
DR   Pfam; PF00004; AAA; 1.
DR   Pfam; PF07724; AAA_2; 1.
DR   Pfam; PF17871; AAA_lid_9; 1.
DR   Pfam; PF02861; Clp_N; 2.
DR   Pfam; PF10431; ClpB_D2-small; 1.
DR   PRINTS; PR00300; CLPPROTEASEA.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM01086; ClpB_D2-small; 1.
DR   SUPFAM; SSF81923; Double Clp-N motif; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR   PROSITE; PS00870; CLPAB_1; 1.
DR   PROSITE; PS00871; CLPAB_2; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW   Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW   ECO:0000256|RuleBase:RU004432};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..23
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           24..890
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5002869410"
FT   DOMAIN          278..422
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
FT   DOMAIN          562..748
FT                   /note="AAA+ ATPase"
FT                   /evidence="ECO:0000259|SMART:SM00382"
FT   DOMAIN          746..845
FT                   /note="Clp ATPase C-terminal"
FT                   /evidence="ECO:0000259|SMART:SM01086"
SQ   SEQUENCE   890 AA;  96716 MW;  259370ED4F33594B CRC64;
     MRTVSLNLLT VSFSVCLCTP INALSLHHNV GRTSFLPTRS SPIASNTICK SRFHQFSSGQ
     RRTPSSSSLS MIFERMSEEC IGSLVTAQNE SARLGQSTVG CEVMTLGIID RPEKARRTLK
     SYGITLRKAK LTVETINNIF TMSPQLLNMN KKARDVELPF APALKRVLTF AGAIADSLDS
     PTVNSEHVLL ALMEGVDSTT FSAAEFCRRL VMDIKYPNEP MVGEGPQLVS GNGGELSTPT
     LSEVGVDLTD LAARMELDPV HGRDEEVRAA LRTLVRRRKN NPCLMGEPGV GKTAIAEGVA
     QILAAPNMLR NHRIISLELA NLVAGTKYRG EFEERLQAIV EEVTDERAPP TILFIDEIHT
     LVGAGSAEGG IDAANMLKPA LARGKLQVIG ATTISEYRKY IEKDAALERR LQPLMVKEPT
     IDQTVQILEA IAEQYGAHHG VRYTPESLVA AAKLSERYVT DRFLPDKAID LLDEAGASVH
     IEHAFNPSGS TNTPEVTDQD ISSIISQWTN IPIGKLTSTE SSTLLTLESS LASRVKGQER
     AIKSIARAVR RARSGLRDAG RPVASFLFCG STGVGKTWLA KSLAAQYYGS EKDMVRIDMS
     EYMEKHTASR LTGPPPGYVG YEEGGQLTEA VRRAPHSVVL LDEIEKAHRD VLNVLLQVME
     DGVLTDGKGR TICFKNVILV MTSNVGSAKI MELVNGDAGE FDSDTTSLDA AEDYAALSEV
     VQEELTKEMK PELLNRIDEI IVFSPLGDEN LRDIAKAIVD ASIERAFKER SITLSASDSL
     IDAVVMDGSM NAAEFGARPM RRAAQRLFED AVSDAIVRGF LQEDDHATVD MGLSTSASGM
     PTVVIMREKD GELLVVDVDD GSGGIGMAAS SRKVNGLDRQ ESDELKTEMF
//
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