ID B8BZ44_THAPS Unreviewed; 616 AA.
AC B8BZ44;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 08-NOV-2023, entry version 46.
DE RecName: Full=Chitin-binding type-2 domain-containing protein {ECO:0000259|PROSITE:PS50940};
GN ORFNames=THAPSDRAFT_22215 {ECO:0000313|EMBL:EED93283.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED93283.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED93283.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED93283.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED93283.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED93283.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000641; EED93283.1; -; Genomic_DNA.
DR RefSeq; XP_002289746.1; XM_002289710.1.
DR AlphaFoldDB; B8BZ44; -.
DR PaxDb; 35128-Thaps22215; -.
DR EnsemblProtists; EED93283; EED93283; THAPSDRAFT_22215.
DR GeneID; 7447917; -.
DR KEGG; tps:THAPSDRAFT_22215; -.
DR eggNOG; ENOG502R91P; Eukaryota.
DR HOGENOM; CLU_443813_0_0_1; -.
DR InParanoid; B8BZ44; -.
DR Proteomes; UP000001449; Chromosome 4.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0008061; F:chitin binding; IEA:InterPro.
DR Gene3D; 1.10.530.10; -; 1.
DR Gene3D; 2.170.140.10; Chitin binding domain; 2.
DR InterPro; IPR002557; Chitin-bd_dom.
DR InterPro; IPR036508; Chitin-bd_dom_sf.
DR PANTHER; PTHR21113; AGAP001705-PA; 1.
DR PANTHER; PTHR21113:SF4; CHITIN-BINDING TYPE-4 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01607; CBM_14; 2.
DR SMART; SM00494; ChtBD2; 2.
DR SUPFAM; SSF57625; Invertebrate chitin-binding proteins; 2.
DR PROSITE; PS50940; CHIT_BIND_II; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT DOMAIN 94..154
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
FT DOMAIN 182..240
FT /note="Chitin-binding type-2"
FT /evidence="ECO:0000259|PROSITE:PS50940"
SQ SEQUENCE 616 AA; 66472 MW; 7A7B25E89BC69EF1 CRC64;
MSNDVLVLGS ANSDQWHYAL VKDTTVLMKR RRLLVMFSCR CAHNSRRSSR RRRASPCTTQ
RWRQSTSTTI PLALTTTTLL LLLSHPHQTT SAPCDACTLT PNGFAVVPGS GCQQYVSCQD
GVAAGGGAQS CNSGLIFDLN IKGCNWDYMV TCPPDPVCED EKVDEKEEED GDDAEEEIKC
EIDICASGQS GNVVVPFSDC SQYVQCSMGV PGTIQNCPEG QMYSERIMAC NIISQVTCPP
DPTCPPSASP TLTPTLSAMP TFVNSTAPSE APSGRQKINN SAVIAAGGGV ITSETLEGIG
KRTPSPFSYN GFKESLHTMI TMSVDGHTFY IGEANSNNGR VYGLVNIAAF LSQSVVDSIQ
HGSCDEVNSD IVGGVLPISN ACGQNGMSYN DMTCPAGEEK YACQVDDTMR VEGVASTLDD
EDKPRAFYCG PSSDYDGYTG SWDYVSGTES RDGPVENALG KTDVQGCCWW GRGSIQLKGL
CSYGKLNYFL GKRAADAGRP SLFPDIDFCK DPGSICSNEK YPDLKWIAGM FRWITEIQSY
DTAQFSYMQQ LVAFVDGGLQ DLSFIHQVSG IVEQGCHDPP CVEGAEMKGA DRKAMFVKTL
KLFGLNVNDA VASARR
//
