ID B8C307_THAPS Unreviewed; 460 AA.
AC B8C307;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 56.
DE RecName: Full=Zinc finger ZPR1-type domain-containing protein {ECO:0000259|SMART:SM00709};
DE Flags: Fragment;
GN ORFNames=THAPSDRAFT_34441 {ECO:0000313|EMBL:EED92475.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED92475.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED92475.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED92475.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED92475.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED92475.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
CC -!- SIMILARITY: Belongs to the ZPR1 family.
CC {ECO:0000256|ARBA:ARBA00008354}.
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DR EMBL; CM000642; EED92475.1; -; Genomic_DNA.
DR RefSeq; XP_002290723.1; XM_002290687.1.
DR AlphaFoldDB; B8C307; -.
DR STRING; 35128.B8C307; -.
DR PaxDb; 35128-Thaps34441; -.
DR EnsemblProtists; EED92475; EED92475; THAPSDRAFT_34441.
DR GeneID; 7450090; -.
DR KEGG; tps:THAPSDRAFT_34441; -.
DR eggNOG; KOG2703; Eukaryota.
DR HOGENOM; CLU_024138_5_0_1; -.
DR InParanoid; B8C307; -.
DR OMA; VERYKCT; -.
DR Proteomes; UP000001449; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 2.60.120.1040; ZPR1, A/B domain; 2.
DR Gene3D; 2.20.25.420; ZPR1, zinc finger domain; 1.
DR InterPro; IPR004457; Znf_ZPR1.
DR InterPro; IPR040141; ZPR1.
DR InterPro; IPR042451; ZPR1_A/B_dom.
DR InterPro; IPR042452; ZPR1_Znf1/2.
DR NCBIfam; TIGR00310; ZPR1_znf; 1.
DR PANTHER; PTHR10876; ZINC FINGER PROTEIN ZPR1; 1.
DR PANTHER; PTHR10876:SF0; ZINC FINGER PROTEIN ZPR1; 1.
DR Pfam; PF03367; zf-ZPR1; 2.
DR SMART; SM00709; Zpr1; 2.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 1..149
FT /note="Zinc finger ZPR1-type"
FT /evidence="ECO:0000259|SMART:SM00709"
FT DOMAIN 231..406
FT /note="Zinc finger ZPR1-type"
FT /evidence="ECO:0000259|SMART:SM00709"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EED92475.1"
FT NON_TER 460
FT /evidence="ECO:0000313|EMBL:EED92475.1"
SQ SEQUENCE 460 AA; 50767 MW; 5285CEC342E8E6C0 CRC64;
CPNCQSPNAP TTILPTNTLH ESVIMSLTCP DGNFHDIQIN IGGTIQPRGQ RTVITVSSRR
DLDRQIVKSD SATVFLPSVD DFEIPQHTQV GVCTIEGLLR QAACNLEKWQ AERLRLGDVD
NFHRFNLHNN YMPFNLILDD AAGNSFIENP YAPSSDPNTT TEEYIRTPAQ DIELGLQAST
EDEDVGELRG QHSVDIDECI LSSLSIQSKS NNSQQSSTTE LGRDEVMKFP TNCPSCNASS
ETDICVIAIP HFKEVIIMCL FCEQCGYKSS EIKGGGAIPS VGTRTTLQVD RADDLAREVL
KSDTAGISIP ELDLELNEGG LDGVYTTVEG LLMKMHDRLK EVNPFGVGDT SVKHHANNDD
REFSDPLPRH ARFVQFLSRL KAMAEGRVLP FVLVISDPLS NSFIGPIPEV ATRLALQAEK
EGSLTCYETF VDEGLSAEEY ERTDEQNVNL GLSDMITEHY
//
