ID B8C6Z1_THAPS Unreviewed; 346 AA.
AC B8C6Z1;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 08-NOV-2023, entry version 46.
DE RecName: Full=Nucleotide-diphospho-sugar transferase domain-containing protein {ECO:0000259|Pfam:PF03407};
GN ORFNames=THAPSDRAFT_7596 {ECO:0000313|EMBL:EED90652.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED90652.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED90652.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED90652.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED90652.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED90652.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000644; EED90652.1; -; Genomic_DNA.
DR RefSeq; XP_002291801.1; XM_002291765.1.
DR AlphaFoldDB; B8C6Z1; -.
DR PaxDb; 35128-Thaps7596; -.
DR EnsemblProtists; EED90652; EED90652; THAPSDRAFT_7596.
DR GeneID; 7452809; -.
DR KEGG; tps:THAPSDRAFT_7596; -.
DR eggNOG; ENOG502S87T; Eukaryota.
DR HOGENOM; CLU_802914_0_0_1; -.
DR InParanoid; B8C6Z1; -.
DR Proteomes; UP000001449; Chromosome 8.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0016757; F:glycosyltransferase activity; IBA:GO_Central.
DR InterPro; IPR005069; Nucl-diP-sugar_transferase.
DR PANTHER; PTHR47032; UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED; 1.
DR PANTHER; PTHR47032:SF1; UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED; 1.
DR Pfam; PF03407; Nucleotid_trans; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 110..254
FT /note="Nucleotide-diphospho-sugar transferase"
FT /evidence="ECO:0000259|Pfam:PF03407"
SQ SEQUENCE 346 AA; 39364 MW; 18305ED8BA83FE96 CRC64;
MNQTNLINAS LLAAMVISLT TIIYSTIGLH HLTGSPSYIN YDVINSPALQ QELQSGVGLV
TTDGGWGPPS SNQKRHDDIK ILAFTDKGYL PIANVWYNRL TVLGYKEHYI VAHDEKSYRI
FQKLNYRVLD AIIEDPEHDR PIKGFWKQIM AARLHLTMEL LRNGTHLLVT DVDNVFSRYV
PLYGFLDEGY DVFHAYEMRY PTYIFDEMGF VVCSGHQFLR SSPGTLRFME LMENRCKGDK
CDDQVVYNEV FWRELNIEWD GDGPTHDGAL RLTGNNTEND GLLVESATGR SRTTNHTIKI
WDRDFAWRLA GGIPEMCPSL NNWVGMPTKV ELKDRNVIDG NGGFCG
//
