ID B8DJU3_DESVM Unreviewed; 816 AA.
AC B8DJU3;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 81.
DE SubName: Full=ATP-dependent Clp protease, ATP-binding subunit clpA {ECO:0000313|EMBL:ACL07415.1};
GN OrderedLocusNames=DvMF_0458 {ECO:0000313|EMBL:ACL07415.1};
OS Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F).
OC Bacteria; Thermodesulfobacteriota; Desulfovibrionia; Desulfovibrionales;
OC Desulfovibrionaceae; Desulfovibrio.
OX NCBI_TaxID=883 {ECO:0000313|EMBL:ACL07415.1};
RN [1] {ECO:0000313|EMBL:ACL07415.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Miyazaki F {ECO:0000313|EMBL:ACL07415.1};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Hazen T.C.,
RA Richardson P.;
RT "Complete sequence of Desulfovibrio vulgaris str. 'Miyazaki F'.";
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CP001197; ACL07415.1; -; Genomic_DNA.
DR AlphaFoldDB; B8DJU3; -.
DR STRING; 883.DvMF_0458; -.
DR KEGG; dvm:DvMF_0458; -.
DR eggNOG; COG0542; Bacteria.
DR HOGENOM; CLU_005070_4_2_7; -.
DR OMA; GRVIQEH; -.
DR OrthoDB; 9803641at2; -.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008233; F:peptidase activity; IEA:UniProtKB-KW.
DR GO; GO:0043335; P:protein unfolding; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 2.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR013461; ClpA.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR02639; ClpA; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF111; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|ARBA:ARBA00023186, ECO:0000256|RuleBase:RU004432};
KW Hydrolase {ECO:0000313|EMBL:ACL07415.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432}; Protease {ECO:0000313|EMBL:ACL07415.1};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 1..145
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT REGION 139..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 816 AA; 88332 MW; 17CD557F24BEA86D CRC64;
MIGRRLEAAL TAAVNDVRTR NHEFLTLEHL LYAITGEDAG KHILEAVGVD VKSLRLRLET
FFATHLEPLP ADTPTEVVQT LGVQRVLQRA IRHMQSAGKG AVEIGDVLAA IFEEDDAYAT
YFLKSQGVTR LDVLQHISHG APQGGDVDGG DDAEGEDGAP DTPRIDALEK FTVDLTARAR
DGRIDPLIGR VKELERTIQV LARRRKNNPL YVGDPGVGKT AIAEGLALRV AGGDVPEEFR
DVRIFALDMG ALLAGTKYRG DFEQRLKGVI TDLGKVPGAI LFIDEIHTIV GAGSTSGGSM
DASNILKPVL ADGSIRCIGS TTYEEYRNHF EKDRALSRRF QKIDVQEPSQ DECVDILKGL
RPYYEDHHKV RYTLPALRAA VELSARYITE RLLPDKAIDV LDEAGAAARL RRGARAASAS
DAAIGVKEVE KVVARMAQIP SRTVSSSDRD RLRTLDEDLR NVVFGQDAAV GILSRAILRA
RAGLGREDRP TGSFLFYGPT GVGKTELARR LAEVMGIGFL RYDMSEYMEK HSVSRLIGAP
PGYVGFDQGG LLTEAIRKQP YTVLLLDEIE KAHPDIFNIL LQVMDYATLT DNTGRKADFR
NVVLIMTSNA GVREMSAPAI GFGATAQEDM AGKGRKAVEN MFSPEFRNRL DAMIPFAGLT
TPVMERIVDK FVLELGSGLK DRRVRLELTP AARARLAEKG FEPAFGARPL RRVIRTALED
ELAREVLFGK LRKGGTAIVD VAAPEAAAAP ARPARKGKGK AAARDGAPSA VSADVAKAAP
TVPATVGPSA DQQGIAGLGL VFRYEPLGGD EAATDK
//