ID B8LDK9_THAPS Unreviewed; 410 AA.
AC B8LDK9;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE RecName: Full=tRNA/rRNA methyltransferase SpoU type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=THAPSDRAFT_25510 {ECO:0000313|EMBL:EED86567.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED86567.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED86567.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED86567.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED86567.1, ECO:0000313|Proteomes:UP000001449}
RP GENOME REANNOTATION.
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED86567.1};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Schmutz J., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T.,
RA Bruce D., Pitluck S., Rokhsar D., Armbrust V.;
RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; DS999420; EED86567.1; -; Genomic_DNA.
DR RefSeq; XP_002297099.1; XM_002297063.1.
DR AlphaFoldDB; B8LDK9; -.
DR PaxDb; 35128-Thaps25510; -.
DR EnsemblProtists; EED86567; EED86567; THAPSDRAFT_25510.
DR GeneID; 7444390; -.
DR KEGG; tps:THAPSDRAFT_25510; -.
DR eggNOG; KOG2506; Eukaryota.
DR HOGENOM; CLU_671753_0_0_1; -.
DR InParanoid; B8LDK9; -.
DR Proteomes; UP000001449; Unassembled WGS sequence.
DR Gene3D; 3.40.1280.10; -; 1.
DR InterPro; IPR029028; Alpha/beta_knot_MTases.
DR InterPro; IPR029026; tRNA_m1G_MTases_N.
DR PANTHER; PTHR43191:SF7; OBP33PEP LIKE PROTEIN; 1.
DR PANTHER; PTHR43191; RRNA METHYLTRANSFERASE 3; 1.
DR SUPFAM; SSF75217; alpha/beta knot; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 102..136
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..46
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..118
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 410 AA; 46046 MW; 55D0A873A935D97A CRC64;
MNTADDDKRK IAHGPSVHAI KRAKYEAKQE RLRQAAEQEQ QRRQTTSSHH HTYAVQNVNH
AQGLAKWSSW VDNDRETRTT RSEFVTAEDV REIRQMRMGK QRCNNFPSQP TDASCGTSLG
GYKGNEAQAD SKEDGERRGR LLRIMEWIEP FFDLKEVPST AGNTDNLSKG THTNSRLFVA
EGTEAVRLMM QKCEHRPISD SCGMNESGGM NPPVHLLSIL SKPSTFFDPP TCLIDELKDY
STNEALPFNI IIGTEDALTE IVGFPVARGA MVCGAVPTYN NAYQSLKNLL MRSTVDETGV
GREQTPEAVT PKTIIPTEIT QPQQRQIKRI IALDAISNTS NMGSILRTAA AFGVDVILLS
DDSCDAWYRQ SPWWTMNLTI LLLRRMGLEM IVFQHSLRER GTRNPPLCHQ
//
