GenomeNet

Database: UniProt
Entry: B8LES1_THAPS
LinkDB: B8LES1_THAPS
Original site: B8LES1_THAPS 
ID   B8LES1_THAPS            Unreviewed;       163 AA.
AC   B8LES1;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   02-DEC-2020, entry version 59.
DE   SubName: Full=Cytochrome c550, PsbV {ECO:0000313|EMBL:EED86160.1};
GN   Name=PsbV {ECO:0000313|EMBL:EED86160.1};
GN   Synonyms=psbV {ECO:0000313|EMBL:EED86160.1};
GN   ORFNames=THAPSDRAFT_bd1039 {ECO:0000313|EMBL:EED86160.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC   Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC   Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED86160.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED86160.1,
RC   ECO:0000313|Proteomes:UP000001449};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA   Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA   Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA   Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA   Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA   Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA   Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA   Wilkerson F.P., Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT   metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED86160.1, ECO:0000313|Proteomes:UP000001449}
RP   GENOME REANNOTATION.
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED86160.1,
RC   ECO:0000313|Proteomes:UP000001449};
RG   Diatom Consortium;
RA   Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA   Schmutz J., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T.,
RA   Bruce D., Pitluck S., Rokhsar D., Armbrust V.;
RL   Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the cytochrome c family. PsbV subfamily.
CC       {ECO:0000256|ARBA:ARBA00010433}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; DS999447; EED86160.1; -; Genomic_DNA.
DR   RefSeq; XP_002297520.1; XM_002297484.1.
DR   RefSeq; YP_874494.1; NC_008589.1.
DR   SMR; B8LES1; -.
DR   EnsemblProtists; EED86160; EED86160; THAPSDRAFT_bd1039.
DR   GeneID; 4524789; -.
DR   GeneID; 7447380; -.
DR   KEGG; tps:THAPSDRAFT_bd1039; -.
DR   HOGENOM; CLU_104149_1_0_1; -.
DR   InParanoid; B8LES1; -.
DR   Proteomes; UP000001449; Unassembled WGS sequence.
DR   GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW.
DR   GO; GO:0042651; C:thylakoid membrane; IEA:InterPro.
DR   GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR   GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.
DR   GO; GO:0022904; P:respiratory electron transport chain; IEA:InterPro.
DR   Gene3D; 1.10.760.10; -; 1.
DR   HAMAP; MF_01378; PSII_Cyt550; 1.
DR   InterPro; IPR009056; Cyt_c-like_dom.
DR   InterPro; IPR036909; Cyt_c-like_dom_sf.
DR   InterPro; IPR029490; Cytochrom_C550.
DR   InterPro; IPR016003; PSII_cyt_c550.
DR   InterPro; IPR017851; PSII_PsbV_cyt_c550.
DR   Pfam; PF14495; Cytochrom_C550; 1.
DR   PIRSF; PIRSF005890; Phot_II_cyt_c550; 1.
DR   SUPFAM; SSF46626; SSF46626; 1.
DR   TIGRFAMs; TIGR03045; PS_II_C550; 1.
DR   PROSITE; PS51007; CYTC; 1.
PE   3: Inferred from homology;
KW   Heme {ECO:0000256|ARBA:ARBA00022617, ECO:0000256|PROSITE-ProRule:PRU00433};
KW   Iron {ECO:0000256|ARBA:ARBA00023004, ECO:0000256|PROSITE-ProRule:PRU00433};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW   ProRule:PRU00433}; Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW   Photosystem II {ECO:0000256|ARBA:ARBA00023276};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Thylakoid {ECO:0000256|ARBA:ARBA00023078}.
FT   SIGNAL          1..26
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           27..163
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5002876686"
FT   DOMAIN          50..149
FT                   /note="Cytochrome c"
FT                   /evidence="ECO:0000259|PROSITE:PS51007"
SQ   SEQUENCE   163 AA;  17840 MW;  2B3557935D82CE9F CRC64;
     MFKTYSKSFA CILFCIFNIF VVSASAIDLD EATRTVVTDS SGNTTVLTPE QVKRGKRLFN
     ATCGACHTGG ITKTNPNVGL DPEALSLATP RRDNISALVD YLKNPTTYDG LESIAEIHPS
     IKSADIYPRM RSLTDEDLYS IAGHIMLQPK IVAEKWGGGK IYF
//
DBGET integrated database retrieval system