ID B9GP88_POPTR Unreviewed; 1896 AA.
AC B9GP88;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=MI domain-containing protein {ECO:0000259|PROSITE:PS51366};
GN ORFNames=POPTR_002G140200 {ECO:0000313|EMBL:PNT49625.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT49625.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT49625.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SIMILARITY: Belongs to the eukaryotic initiation factor 4G family.
CC {ECO:0000256|ARBA:ARBA00005775}.
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DR EMBL; CM009291; PNT49625.1; -; Genomic_DNA.
DR RefSeq; XP_002302506.2; XM_002302470.2.
DR STRING; 3694.B9GP88; -.
DR GeneID; 7483809; -.
DR KEGG; pop:7483809; -.
DR eggNOG; KOG0401; Eukaryota.
DR HOGENOM; CLU_001191_0_0_1; -.
DR InParanoid; B9GP88; -.
DR OMA; QFGGPNQ; -.
DR OrthoDB; 1123866at2759; -.
DR Proteomes; UP000006729; Chromosome 2.
DR GO; GO:0016281; C:eukaryotic translation initiation factor 4F complex; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003743; F:translation initiation factor activity; IBA:GO_Central.
DR Gene3D; 1.25.40.180; -; 2.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR045208; IF4G.
DR InterPro; IPR003891; Initiation_fac_eIF4g_MI.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR23253; EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; 1.
DR PANTHER; PTHR23253:SF9; EUKARYOTIC TRANSLATION INITIATION FACTOR 4G1, ISOFORM B-RELATED; 1.
DR Pfam; PF02847; MA3; 1.
DR Pfam; PF02854; MIF4G; 1.
DR SMART; SM00544; MA3; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 2.
DR PROSITE; PS51366; MI; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000256|ARBA:ARBA00022540};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 1708..1832
FT /note="MI"
FT /evidence="ECO:0000259|PROSITE:PS51366"
FT REGION 1..155
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 177..261
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 557..588
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..702
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 794..946
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1098..1141
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1338..1364
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1471..1518
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1679..1702
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..146
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 179..193
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 220..237
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 560..588
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 659..702
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 810..824
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 841..859
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 871..891
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1112..1126
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1471..1494
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1688..1702
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1896 AA; 204918 MW; DD5A43E0E5CC8F5C CRC64;
MSYNQSRGGS DKSDLQYRKP GRSVSSSQQR TSSVSHGKGG GPPVPSPSSS SLSSNRSFNK
KPSNLTQGGG QSSRVNLPSG VNSSDSGNNA ASTIRNVQNG VLTQHQSHGT SDASSVAKPT
EASAAQRSTR DVPKAPTSQP AAISSESGAH MTPAKAPLDS SKAFAFQFGS ISPGFMNGMQ
VPARTSSAPP NLDEQKRDQA HHDTFRPAPS LPTPAPKQQL PRKEVSSSVQ TSTGEVHLVP
KASKETQLPP APSVSQTQKP SVLPIPMNSL QMKYQQPPVS VQFRGPSPQI QSQGVPANSL
HVPIQLPMGN APQVQQSVFI QGLQHHPMQP QGMMHQSQTM SFTNPMGPQI PQLGSLAYGM
TSQYSAQQGG KFGSPHKTPV KITDPKTHEE LRLDKRTDAY PDAGSSGLRS HLNVPQTQPI
PSFAPSRPIN YYPSSYNASN LFFPAPSSLP LTGSQIAPNS QLPPRFNYPV SQPPQNAPYM
NASALNSLPL SKSGTVSHGV AEPQNSEHAR DARNAISLTP SGAVQVTVKP AVGSHGEKVV
EPSFPKISSV VEKGGFFKSS RSSGEASPSH SQRDSEASSE SSLQRIKSGG ESLVKPLPVA
AKQPAAVAVD GAASASLAQC EEAIPSVSNA EGRKKEALSG SNFIKEHQKK PGKKGNIQPQ
HQIGGQTTLS SHTLEHGVSS GTGVSETAEN EKSPPSLANS EVLTKSIKEP VSTIAAWNPD
VSETKVDNAG DAFDSVSSQV PVAGIAHTTH ISPHAKLDDS SQLEKLKCEI PATEDEIEKS
LSECPKQDYN ISSASINSKS ADQVKQDKEV SDSVVTSVGN EVPASETAQE GLVEPVTCHT
ANDHISDNAG ASTSRKFNSA DDIKPLDASL SHSDNIGNKE ASVTKSGISG HQGSPPVPDL
SEATAKHEGE GAENAGSGTV PLEVSGYKEK PSELTRSKST ANRMKKKKKE FLLKADLAGT
TSDLYGAYKG PEEKKENVIS SEVIESTSPN LKQAPADALQ VQTVASEKSM QNKAEPDDWE
DATDMSTLKL ESLIDGELSL GGLGQHDTDG NANKLKKYSR DFLLKFSEQC TDLPGGFQIP
SDIAGSLMGV GVSHLADRDP CPSPARVMDR SNSGSRIDRR GSGIVDDGRW SKQPGPSGPG
RDLHLDISYG ANVGFRPVAG GNYGALRNPR AQSPVHYGGG ILSGPMQSMG PQGGLQRGGL
DADRWQRAAI FVHKGSFSSP QTPLQTMHKA EKKYEVGKVT DEEAAKQRQL KGILNKLTPQ
NFEKLFEQVK AVNIDNVVTL NGVISQIFDK ALMEPTFCEM YANFCFHLAA ELPELTEDNE
KVTFKRILLN KCQEEFERGE REQEEANKAD EEGEIKQSEE EREEKRIKAR RRMLGNIRLI
GELYKKRMLT ERIMHECIKK LLGQYQNPDE EDLEALCKLM STIGEMIDHP KAKEHMDVYF
DMMAKLSNNM KLSSRVRFML KDSIDLRKNK WQQRRKVEGP KKIEEVHRDA AQERQLQTSR
LARNPGINPS PRRGPMDFGP RGSTMLPSLN AQMGGFRGFP TQVRGHGTQD VRFEEKQSYE
ARTMSVPLPQ RPLGDDSITL GPQGGLARGM SIRGQPASMG TLVADISPSP GDPRRMAAGL
NGSSAISGRS NYSPREDIIP RYTPDRFAVP PACDQMNGQE RNMNYVNRDL RNLDHGFDRP
LGSSPPTRAQ GPPFSQTTPT GKLWPEERLR DMSTAAIKEF YSARDEKEVS LCIKELNSPS
FHPSMISIWV TDSFERKDLE RDLLAKLLVS LARSQNGILD SNQLIKGFES ILTTLEDAVN
DAPKAPEFLG RIIGRVVVEN VVPLSEIGPL LHEGGEEPGS LLKLGLAGDV LGSILEMIKV
EKGEAVLNEI RGASNLRLED FRPPDPNRSR ILEKFI
//
