ID B9H0E4_POPTR Unreviewed; 967 AA.
AC B9H0E4;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE RecName: Full=Clp R domain-containing protein {ECO:0000259|PROSITE:PS51903};
GN ORFNames=POPTR_004G124800 {ECO:0000313|EMBL:PNT40883.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT40883.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT40883.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|ARBA:ARBA00008675, ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM009293; PNT40883.1; -; Genomic_DNA.
DR RefSeq; XP_002305376.1; XM_002305340.2.
DR AlphaFoldDB; B9H0E4; -.
DR STRING; 3694.B9H0E4; -.
DR EnsemblPlants; Potri.004G124800.1.v4.1; Potri.004G124800.1.v4.1; Potri.004G124800.v4.1.
DR GeneID; 7472615; -.
DR Gramene; Potri.004G124800.1.v4.1; Potri.004G124800.1.v4.1; Potri.004G124800.v4.1.
DR KEGG; pop:7472615; -.
DR eggNOG; KOG1051; Eukaryota.
DR HOGENOM; CLU_005070_4_0_1; -.
DR InParanoid; B9H0E4; -.
DR OrthoDB; 35211at2759; -.
DR Proteomes; UP000006729; Chromosome 4.
DR ExpressionAtlas; B9H0E4; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR GO; GO:0034605; P:cellular response to heat; IBA:GO_Central.
DR GO; GO:0042026; P:protein refolding; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.1780.10; Clp, N-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR017730; Chaperonin_ClpB.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR036628; Clp_N_dom_sf.
DR InterPro; IPR004176; Clp_R_dom.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR NCBIfam; TIGR03346; chaperone_ClpB; 1.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF18; HEAT SHOCK PROTEIN 78, MITOCHONDRIAL; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF02861; Clp_N; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF81923; Double Clp-N motif; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51903; CLP_R; 1.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|RuleBase:RU004432};
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|PROSITE-
KW ProRule:PRU01251}.
FT DOMAIN 75..219
FT /note="Clp R"
FT /evidence="ECO:0000259|PROSITE:PS51903"
FT COILED 514..606
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 967 AA; 108539 MW; BABB6A2CF182EB67 CRC64;
MATTTATAAS FSLCPFYSDS ISNGLLPRKS LISFPVKRNS VKSLELNKRN GAFSTRAKPS
SFVVRCAASS NGRVTQQEFT DMAWQGIVSS LDVAKENKHQ IVETEHLMKA LLEQKNGLAR
RIFSKVGVDN TRLLEATDKS IQRQPKVHSE STSSMLGRDL ETLIQRAREY KKEYGDSFVS
VEHLVLGFAQ DQRFGKQLFK DFQISLQTLK SAIESIRGRQ SVIDQDPEGK YEALEKYGKD
LTAMAKAGKL DPVIGRDEEI RRCIQILSRR TKNNPVLIGE PGVGKTAISE GLAQRIVEGD
VPQALMNRKL ISLDMGSLIA GAKYRGEFED RLKAVLKEVT DSDGQIILFI DEIHTVVGAG
ATNGAMDAGN LLKPMLGRGE LRCIGATTLD EHRKYIEKDP ALERRFQQVF VDQPTVEDTI
SILRGLRERY ELHHGVRISD SALVEAAVLS DRYISGRFLP DKAIDLVDEA AAKLKMEITS
KPTALDEINR SVLKLEMERL SLMNDTDKAS KDRLSRLDTE LSLLKKKQAE LTEQWEHEKS
VMTCIQSIKE EIDRVNLEIQ QAEREYDLNR AAELKYRSLS SLQRQLESAE KELDEYIKSG
KSMLREEVTG DDIAEIVSKW TGIPISKLKQ SEREKLLHLE DELHKRVVGQ DPAVKAVAEA
IQRSRAGLSD PHRPIASFMF MGPTGVGKTE LAKALASYMF NTEEALVRID MSEYMEKHSV
SRLVGAPPGY VGYEEGGQLT ETVRRRPYAV ILFDEIEKAH SDVFNIFLQV LDDGRVTDSQ
GRTVSFTNTV IIMTSNVGSQ YILDTDDNLP KEVANETIKR RVMDAARSVF RPEFMNRVDE
YIVFQPLDRD QINSIVRLQL GRVQQRLADR KIKLLVTDAA VEFLGTLGYD PNYGARPVKR
VIQQHVENEL AKGILRGELK DEDSVAIDTQ VTAFANGHLP QQKLVFKRLE TSEDKAAAES
RAFSQTV
//
