ID B9H660_POPTR Unreviewed; 549 AA.
AC B9H660;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 81.
DE RecName: Full=Ubiquitin family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_005G100200 {ECO:0000313|EMBL:PNT35940.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT35940.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT35940.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009294; PNT35940.1; -; Genomic_DNA.
DR RefSeq; XP_002306425.1; XM_002306389.2.
DR AlphaFoldDB; B9H660; -.
DR STRING; 3694.B9H660; -.
DR EnsemblPlants; Potri.005G100200.3.v4.1; Potri.005G100200.3.v4.1; Potri.005G100200.v4.1.
DR GeneID; 7480454; -.
DR Gramene; Potri.005G100200.3.v4.1; Potri.005G100200.3.v4.1; Potri.005G100200.v4.1.
DR KEGG; pop:7480454; -.
DR eggNOG; KOG0010; Eukaryota.
DR HOGENOM; CLU_024293_4_0_1; -.
DR InParanoid; B9H660; -.
DR OMA; AEMFREM; -.
DR OrthoDB; 5491123at2759; -.
DR Proteomes; UP000006729; Chromosome 5.
DR ExpressionAtlas; B9H660; baseline and differential.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0031593; F:polyubiquitin modification-dependent protein binding; IBA:GO_Central.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd14399; UBA_PLICs; 1.
DR CDD; cd16106; Ubl_Dsk2p_like; 1.
DR Gene3D; 1.10.260.100; -; 1.
DR Gene3D; 1.10.8.10; DNA helicase RuvA subunit, C-terminal domain; 1.
DR InterPro; IPR006636; STI1_HS-bd.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR015496; Ubiquilin.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR InterPro; IPR019956; Ubiquitin_dom.
DR PANTHER; PTHR10677; UBIQUILIN; 1.
DR PANTHER; PTHR10677:SF53; UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00627; UBA; 1.
DR Pfam; PF00240; ubiquitin; 1.
DR PRINTS; PR00348; UBIQUITIN.
DR SMART; SM00727; STI1; 4.
DR SMART; SM00165; UBA; 1.
DR SMART; SM00213; UBQ; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50030; UBA; 1.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 22..91
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT DOMAIN 502..546
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 102..128
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 297..358
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 102..123
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 297..353
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 549 AA; 58488 MW; 6A096FE6EF3FEE0A CRC64;
MGGGNGDVEG GSNDTDGGDD EVNVNIRCSN GSKFTVKISL SSTVDSFKQL IANQCDVPSD
QQRLIYKGRI LKDDQTLQSY GLEADHAVHL VRGFAPSAPV NATAATNTGG SNTAPTNTRA
AGSTDDGELG GSGFGSLFPG LGLNGLGGSG GLLGAGLPEF EQVQQQLTQN PNIMRDIMNT
PVVQNLMNNP EIMRNLLMNN PQMREIIDRN PELAHILNDP STLRQTLEAA RNPELMREMM
RNTDRAMSNI ESSPEGFNML RRMYETVQEP FLNATTMAGN AGGDSANPFA ALLGTQTGNQ
ARDGSTNLST TSSETTTGSP APNTNPLPNP WSSGGAQTNT TRSNPTSDTR PQAPTGLGGL
GLPDLDNMFS AMPDAAMVSQ LMQNPAISQM MQSFMSSPQY MNQILGMNPQ LRSMLDSNPQ
LREMMQNPEF LRQLTSPETM QQLLTFQQSL MSQLGQRQST LAQGQTGAGT GTTNNAGLEM
LMNMFGGLGA GSLAVPNRSN VPPEELYATQ LSQLQEMGFF DTQENIRALI ATAGNVHAAV
ERLLGSTGQ
//
