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Database: UniProt
Entry: B9HB15_POPTR
LinkDB: B9HB15_POPTR
Original site: B9HB15_POPTR 
ID   B9HB15_POPTR            Unreviewed;       718 AA.
AC   B9HB15;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   13-FEB-2019, sequence version 3.
DT   24-JAN-2024, entry version 74.
DE   RecName: Full=USP domain-containing protein {ECO:0000259|PROSITE:PS50235};
GN   ORFNames=POPTR_006G185200 {ECO:0000313|EMBL:PNT32358.2};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS   trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT32358.2, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:PNT32358.2, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA   Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA   Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA   Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA   Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA   Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA   Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA   Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA   Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA   Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA   Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA   Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA   Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA   Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA   Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA   Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
CC   -!- SIMILARITY: Belongs to the peptidase C19 family.
CC       {ECO:0000256|ARBA:ARBA00009085}.
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DR   EMBL; CM009295; PNT32358.2; -; Genomic_DNA.
DR   AlphaFoldDB; B9HB15; -.
DR   Proteomes; UP000006729; Chromosome 6.
DR   ExpressionAtlas; B9HB15; baseline and differential.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR   Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR018200; USP_CS.
DR   InterPro; IPR028889; USP_dom.
DR   InterPro; IPR013087; Znf_C2H2_type.
DR   PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR   PANTHER; PTHR24006:SF663; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 23; 1.
DR   Pfam; PF00443; UCH; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
DR   PROSITE; PS00973; USP_2; 1.
DR   PROSITE; PS50235; USP_3; 1.
DR   PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT   DOMAIN          1..181
FT                   /note="USP"
FT                   /evidence="ECO:0000259|PROSITE:PS50235"
FT   REGION          235..264
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          356..416
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          668..718
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        238..264
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        356..370
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        390..405
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        668..682
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   718 AA;  79247 MW;  B6D8A9A8F6C5D705 CRC64;
     MFLSVCFQVE CQQCSYCSNK FDPFLDLSLE IAKADTLPAL LRNFTAAEML DGGEKHYQCQ
     RCKQKVRAKK WLTVHKAPHV LTIHLKRFHA HDPGRKVDRK VIFDRSLDMK PFVSGSYEGD
     LKYSLYGVLV HYGHNTHSGH YVCFVRTSSG IWHLLNDNQV RQVSEKAVLE QKAYMLFYVR
     DRKTIVPRKP VDVVHKESMK ATFGNNFADL VAKQFSNECV GGGLIGNRLE ATDSPAAMNK
     KDASSVVTSS EIHPKDTSFQ QSSRQTLLKV DSSLETSSAP LSTDPSKLAN SHLGECLPPS
     TASLNSNNVG PKLENASVIT EAKTSDCKEP FSSSSGPQSS AIDKLVTRET SQKINGDQNV
     GVSSQAPYED SCGKTVGEVP RLAPSEGSTD KAFDKSNTVK SPNKPGCESD QGGDIPIESA
     AWKTPSDKAG EGGQYIVHQL VEGLIPTAFV PSVIQNECLQ SKAPDCLPKK KLKNKRRMHL
     GTNLFKVSLG LQKRKKHKKS NCHTSKTSNL IKENLQEQPE NDVFSSELGP STSKISSTVL
     LASMNSRRKM AKSGSRKGDN VRNCRDMGVV DVESVERISP SSAVLAMDEQ RRKISISISE
     VNQGDPREPD CSENSKRYAS QNRMMGVITG GVKETVSPWD GIAMPPQIVE SNGVENLSTG
     YVADEWDEEY DRGKRKKPRQ SMHNFDGPNL LQAFATKKTQ VKKAKIDRSR SGNQPFRI
//
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