ID B9HUV9_POPTR Unreviewed; 117 AA.
AC B9HUV9;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 27-MAR-2024, entry version 63.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|Pfam:PF01476};
GN ORFNames=POPTR_010G231000 {ECO:0000313|EMBL:PNT18251.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT18251.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT18251.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM009299; PNT18251.1; -; Genomic_DNA.
DR RefSeq; XP_002316406.2; XM_002316370.2.
DR AlphaFoldDB; B9HUV9; -.
DR STRING; 3694.B9HUV9; -.
DR EnsemblPlants; Potri.010G231000.1.v4.1; Potri.010G231000.1.v4.1; Potri.010G231000.v4.1.
DR GeneID; 7468456; -.
DR Gramene; Potri.010G231000.1.v4.1; Potri.010G231000.1.v4.1; Potri.010G231000.v4.1.
DR KEGG; pop:7468456; -.
DR eggNOG; ENOG502S4JM; Eukaryota.
DR HOGENOM; CLU_146960_1_0_1; -.
DR InParanoid; B9HUV9; -.
DR OMA; FDQYNES; -.
DR OrthoDB; 639694at2759; -.
DR Proteomes; UP000006729; Chromosome 10.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 3.10.350.10; LysM domain; 1.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR PANTHER; PTHR33648; EMBRYO SAC 1; 1.
DR PANTHER; PTHR33648:SF49; LYSM DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01476; LysM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..36
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 37..117
FT /note="LysM domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5030166221"
FT DOMAIN 56..98
FT /note="LysM"
FT /evidence="ECO:0000259|Pfam:PF01476"
SQ SEQUENCE 117 AA; 13187 MW; 41E933E65AB9C404 CRC64;
MGSVSSSTVM AEKISWYCAL LMALMLVLSC CEVSETELST VGHPRFFENK PCDEIYVVRE
GETLNTISEK CGDPYIVEEN PHIHDPDDVF PGLVIKITPL IDRYTPDDVS SPMRWFV
//
