ID B9HVA1_POPTR Unreviewed; 296 AA.
AC B9HVA1;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 16-OCT-2019, entry version 84.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN ORFNames=POPTR_010G093400 {ECO:0000313|EMBL:PNT15581.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera
OS subsp. trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
OC Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT15581.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT15581.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D.,
RA Boerjan W., Brun A., Brunner A., Busov V., Campbell M., Carlson J.,
RA Chalot M., Chapman J., Chen G.L., Cooper D., Coutinho P.M.,
RA Couturier J., Covert S., Cronk Q., Cunningham R., Davis J.,
RA Degroeve S., Dejardin A., Depamphilis C., Detter J., Dirks B.,
RA Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K.,
RA Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D.,
RA Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M.,
RA Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J., Kelleher C.,
RA Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K.,
RA Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A.,
RA Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P.,
RA Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A.,
RA Sterky F., Terry A., Tsai C.J., Uberbacher E., Unneberg P., Vahala J.,
RA Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M.,
RA Sandberg G., Van de Peer Y., Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC ECO:0000256|SAAS:SAAS00868163}.
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DR EMBL; CM009299; PNT15581.1; -; Genomic_DNA.
DR RefSeq; XP_002315797.1; XM_002315761.2.
DR EnsemblPlants; PNT15581; PNT15581; POPTR_010G093400v3.
DR GeneID; 7459046; -.
DR Gramene; PNT15581; PNT15581; POPTR_010G093400v3.
DR KEGG; pop:7459046; -.
DR eggNOG; KOG0483; Eukaryota.
DR eggNOG; ENOG410Z2UE; LUCA.
DR KO; K09338; -.
DR OMA; GCCDLET; -.
DR Proteomes; UP000006729; Chromosome 10.
DR ExpressionAtlas; B9HVA1; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR003106; Leu_zip_homeo.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000006729};
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 76 136 Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT DNA_BIND 78 137 Homeobox. {ECO:0000256|PROSITE-ProRule:
FT PRU00108}.
FT REGION 57 83 Disordered. {ECO:0000256|SAM:MobiDB-
FT lite}.
FT REGION 172 231 Disordered. {ECO:0000256|SAM:MobiDB-
FT lite}.
FT COMPBIAS 184 231 Polar. {ECO:0000256|SAM:MobiDB-lite}.
SQ SEQUENCE 296 AA; 33534 MW; 382B13C7D52E7FDA CRC64;
MTCNGMAFFP TNFMLQISHD QDDHQPPTSL NPILPSPQDF HGVASFIGKR SSMSFSGIDA
CHEEGNGEDE LSDDGSQAGE KKRRLNMEQV KTLEKNFELG NKLEPERKMQ LARALGLQPR
QIAIWFQNRR ARWKTKQLEK DYDLLKRQFD AIKAENDALQ AQNQKLHAEI LTLKSREPTE
PINLNKETEG SSSNRSENSS DIKLDISRTP AIDSPLSNHH PTSRSFFPSS SSSIRPAGVA
IRPTGVAQLF QTNPSRPDIQ CQKIDQLVKE ENLGNMFCSI EDQSGFWPWL EQQHFN
//