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Database: UniProt
Entry: B9HVA1_POPTR
LinkDB: B9HVA1_POPTR
Original site: B9HVA1_POPTR 
ID   B9HVA1_POPTR            Unreviewed;       296 AA.
AC   B9HVA1;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   16-OCT-2019, entry version 84.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN   ORFNames=POPTR_010G093400 {ECO:0000313|EMBL:PNT15581.1};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera
OS   subsp. trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
OC   Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT15581.1, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:PNT15581.1, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D.,
RA   Boerjan W., Brun A., Brunner A., Busov V., Campbell M., Carlson J.,
RA   Chalot M., Chapman J., Chen G.L., Cooper D., Coutinho P.M.,
RA   Couturier J., Covert S., Cronk Q., Cunningham R., Davis J.,
RA   Degroeve S., Dejardin A., Depamphilis C., Detter J., Dirks B.,
RA   Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K.,
RA   Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA   Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D.,
RA   Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M.,
RA   Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J., Kelleher C.,
RA   Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K.,
RA   Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A.,
RA   Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P.,
RA   Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A.,
RA   Sterky F., Terry A., Tsai C.J., Uberbacher E., Unneberg P., Vahala J.,
RA   Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M.,
RA   Sandberg G., Van de Peer Y., Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-
CC       ProRule:PRU00108, ECO:0000256|RuleBase:RU000682,
CC       ECO:0000256|SAAS:SAAS00868163}.
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DR   EMBL; CM009299; PNT15581.1; -; Genomic_DNA.
DR   RefSeq; XP_002315797.1; XM_002315761.2.
DR   EnsemblPlants; PNT15581; PNT15581; POPTR_010G093400v3.
DR   GeneID; 7459046; -.
DR   Gramene; PNT15581; PNT15581; POPTR_010G093400v3.
DR   KEGG; pop:7459046; -.
DR   eggNOG; KOG0483; Eukaryota.
DR   eggNOG; ENOG410Z2UE; LUCA.
DR   KO; K09338; -.
DR   OMA; GCCDLET; -.
DR   Proteomes; UP000006729; Chromosome 10.
DR   ExpressionAtlas; B9HVA1; baseline.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017970; Homeobox_CS.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR000047; HTH_motif.
DR   InterPro; IPR003106; Leu_zip_homeo.
DR   Pfam; PF02183; HALZ; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   PRINTS; PR00031; HTHREPRESSR.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   PROSITE; PS00027; HOMEOBOX_1; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006729};
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868168};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868171};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682, ECO:0000256|SAAS:SAAS00868176};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT   DOMAIN       76    136       Homeobox. {ECO:0000259|PROSITE:PS50071}.
FT   DNA_BIND     78    137       Homeobox. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00108}.
FT   REGION       57     83       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   REGION      172    231       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS    184    231       Polar. {ECO:0000256|SAM:MobiDB-lite}.
SQ   SEQUENCE   296 AA;  33534 MW;  382B13C7D52E7FDA CRC64;
     MTCNGMAFFP TNFMLQISHD QDDHQPPTSL NPILPSPQDF HGVASFIGKR SSMSFSGIDA
     CHEEGNGEDE LSDDGSQAGE KKRRLNMEQV KTLEKNFELG NKLEPERKMQ LARALGLQPR
     QIAIWFQNRR ARWKTKQLEK DYDLLKRQFD AIKAENDALQ AQNQKLHAEI LTLKSREPTE
     PINLNKETEG SSSNRSENSS DIKLDISRTP AIDSPLSNHH PTSRSFFPSS SSSIRPAGVA
     IRPTGVAQLF QTNPSRPDIQ CQKIDQLVKE ENLGNMFCSI EDQSGFWPWL EQQHFN
//
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