ID B9I325_POPTR Unreviewed; 717 AA.
AC B9I325;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 2.
DT 24-JAN-2024, entry version 64.
DE RecName: Full=DDT domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=POPTR_012G072200 {ECO:0000313|EMBL:PNT09932.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT09932.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT09932.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009301; PNT09932.1; -; Genomic_DNA.
DR RefSeq; XP_002318002.2; XM_002317966.2.
DR AlphaFoldDB; B9I325; -.
DR STRING; 3694.B9I325; -.
DR EnsemblPlants; Potri.012G072200.1.v4.1; Potri.012G072200.1.v4.1; Potri.012G072200.v4.1.
DR GeneID; 7483454; -.
DR Gramene; Potri.012G072200.1.v4.1; Potri.012G072200.1.v4.1; Potri.012G072200.v4.1.
DR KEGG; pop:7483454; -.
DR eggNOG; ENOG502QUDP; Eukaryota.
DR HOGENOM; CLU_022510_0_0_1; -.
DR InParanoid; B9I325; -.
DR OMA; QRINYQQ; -.
DR OrthoDB; 947548at2759; -.
DR Proteomes; UP000006729; Chromosome 12.
DR GO; GO:0031213; C:RSF complex; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR028938; Rsf1-like.
DR InterPro; IPR028942; WHIM1_dom.
DR PANTHER; PTHR14296; REMODELING AND SPACING FACTOR 1; 1.
DR PANTHER; PTHR14296:SF3; REMODELING AND SPACING FACTOR 1; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF15612; WHIM1; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 118..163
FT /note="DDT"
FT /evidence="ECO:0000259|Pfam:PF02791"
FT DOMAIN 209..239
FT /note="WHIM1"
FT /evidence="ECO:0000259|Pfam:PF15612"
FT REGION 1..95
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 402..717
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..43
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 72..93
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 402..424
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 426..450
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 454..489
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 490..505
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 506..526
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 527..553
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 554..587
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 588..604
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 605..628
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 678..692
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 717 AA; 82170 MW; DF8C81E4C0AB45EC CRC64;
MSREQPSPSP ISQNDAQTPL NDDAQAQSQS QTPPVNRSNR PSRACTIRAA ARLQQQAVIE
RKQKPKKQEQ QQQLDKSSVQ QKEQCSGGSS KIVTQLVAPP EPAQLPRWSL RSMWELASVL
HFLNVFRHLL NITVEFSAEE FETALITPND TLGDIHMPLL KAIPPVTRMA LTRDTWVTVL
CRKLRDWWHW VADGELPLVA SHGVEVEVYK TLDPSVRVVI LKALCDIRVE QEDIRNYIDN
SLKHGIQLSL FRKERIGGDS QGINYWYEDD PTIGQRLYRE IRKTEVKAKA KAKGSQIIPN
VTYLWETVAT NFEEFQDVSE KLFTSKNRTE ASLGKKLKND MLPEIEKVYK RKERLLKKQH
RQALLLDNFL NIDGLAPGRS LRDRKPVTYT FDDYDRSINE AIKITKRKPP SPEPVHRREG
FSKPEASTNG KWSGPSHASQ HGTFSAASPN SLDYDDMDED HKSEGLDRSN RRRQRPQRYS
AKEFVEAVSD NEADFDSDDD IVGEAVYDDE YLRKRKQKRL SSSSEGDEEY QWDDENGEEE
EEEDEEEGSL SVSEDSDEPQ KFKKLPGRTR RETKLRSVDE IQSGLRRSRR ATRNQINYRQ
YELSESETES IKREKSNASD EHSDASENGE YSARSQSGDS DGNDDEQNMK VDQPVEGDTV
IAREEQNQPP EESNSPVQEE VEGVRKRRFL DLNELAPGSG FDDSPNTVMK DEDRNDF
//
