ID B9I9V3_POPTR Unreviewed; 416 AA.
AC B9I9V3;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 95.
DE RecName: Full=Prokaryotic-type class I peptide chain release factors domain-containing protein {ECO:0000259|PROSITE:PS00745};
GN ORFNames=POPTR_014G133400 {ECO:0000313|EMBL:PNT04617.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT04617.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT04617.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- SIMILARITY: Belongs to the prokaryotic/mitochondrial release factor
CC family. {ECO:0000256|ARBA:ARBA00010835}.
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DR EMBL; CM009303; PNT04617.1; -; Genomic_DNA.
DR RefSeq; XP_002321029.1; XM_002320993.2.
DR AlphaFoldDB; B9I9V3; -.
DR STRING; 3694.B9I9V3; -.
DR GeneID; 7457960; -.
DR KEGG; pop:7457960; -.
DR eggNOG; KOG2726; Eukaryota.
DR HOGENOM; CLU_036856_0_1_1; -.
DR InParanoid; B9I9V3; -.
DR OMA; DHRVGFK; -.
DR OrthoDB; 131884at2759; -.
DR Proteomes; UP000006729; Chromosome 14.
DR ExpressionAtlas; B9I9V3; baseline and differential.
DR GO; GO:0009507; C:chloroplast; IBA:GO_Central.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0016149; F:translation release factor activity, codon specific; IEA:InterPro.
DR GO; GO:0009658; P:chloroplast organization; IBA:GO_Central.
DR GO; GO:0070126; P:mitochondrial translational termination; IBA:GO_Central.
DR GO; GO:0032544; P:plastid translation; IBA:GO_Central.
DR GO; GO:0010027; P:thylakoid membrane organization; IBA:GO_Central.
DR Gene3D; 3.30.160.20; -; 1.
DR Gene3D; 3.30.70.1660; -; 2.
DR Gene3D; 6.10.140.1950; -; 1.
DR HAMAP; MF_00093; Rel_fac_1; 1.
DR InterPro; IPR005139; PCRF.
DR InterPro; IPR000352; Pep_chain_release_fac_I.
DR InterPro; IPR045853; Pep_chain_release_fac_I_sf.
DR InterPro; IPR004373; RF-1.
DR NCBIfam; TIGR00019; prfA; 1.
DR PANTHER; PTHR43804; LD18447P; 1.
DR PANTHER; PTHR43804:SF8; PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC; 1.
DR Pfam; PF03462; PCRF; 1.
DR Pfam; PF00472; RF-1; 1.
DR SMART; SM00937; PCRF; 1.
DR SUPFAM; SSF75620; Release factor; 1.
DR PROSITE; PS00745; RF_PROK_I; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006729}.
FT DOMAIN 280..296
FT /note="Prokaryotic-type class I peptide chain release
FT factors"
FT /evidence="ECO:0000259|PROSITE:PS00745"
SQ SEQUENCE 416 AA; 46756 MW; F272AED02051E372 CRC64;
MNNSLATTSL TARMSPTIPH PHHFRQTPSR IFFLRPTLSR STTPRIVCMA EPYLITKLES
AEKTWKELSV KLGDPDVVSN PSEYQKLAQS VAELDEVVSI FKRFKDCEKM LEDTRALAKE
DGNDEDMAEM IAYEIESLSS ELKQLEEKLT VLLLPSDPLD ARNILLEVRA GTGGDEAGLW
AGDLVRMYQR YSEQNSWKVS VISSSEAEKG GYKTYVMEVK GKSVYSKLKY ESGVHRVQRV
PQTEAQGRVH TSTATVAIMP EVDEVEVVID PKEYELTTAR SGGAGGQNVN KVETAVDLIH
KPTGIRIFCT EERTQLQNRN RALQLLRAKL YEIKVREQQE SIRNQRKMQV GTGARAEKIR
TYNYKDNRVT DHRLKVNFEL TSFLAGDIEN AVQACSALEQ KELLEELAES VGAPAG
//