ID B9IEC4_POPTR Unreviewed; 592 AA.
AC B9IEC4;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 88.
DE RecName: Full=Amidase domain-containing protein {ECO:0000259|Pfam:PF01425};
GN ORFNames=POPTR_015G038600 {ECO:0000313|EMBL:PNT00280.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT00280.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT00280.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM009304; PNT00280.1; -; Genomic_DNA.
DR RefSeq; XP_002322105.1; XM_002322069.2.
DR AlphaFoldDB; B9IEC4; -.
DR STRING; 3694.B9IEC4; -.
DR EnsemblPlants; Potri.015G038600.1.v4.1; Potri.015G038600.1.v4.1; Potri.015G038600.v4.1.
DR GeneID; 7462499; -.
DR Gramene; Potri.015G038600.1.v4.1; Potri.015G038600.1.v4.1; Potri.015G038600.v4.1.
DR KEGG; pop:7462499; -.
DR eggNOG; KOG1124; Eukaryota.
DR eggNOG; KOG1211; Eukaryota.
DR HOGENOM; CLU_009600_17_1_1; -.
DR InParanoid; B9IEC4; -.
DR OrthoDB; 298405at2759; -.
DR Proteomes; UP000006729; Chromosome 15.
DR ExpressionAtlas; B9IEC4; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.90.1300.10; Amidase signature (AS) domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR023631; Amidase_dom.
DR InterPro; IPR036928; AS_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR46310; AMIDASE 1; 1.
DR PANTHER; PTHR46310:SF5; OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC; 1.
DR Pfam; PF01425; Amidase; 1.
DR Pfam; PF13414; TPR_11; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF75304; Amidase signature (AS) enzymes; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 2.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 6..23
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 55..441
FT /note="Amidase"
FT /evidence="ECO:0000259|Pfam:PF01425"
FT REPEAT 473..506
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 541..574
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 458..481
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 467..481
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 592 AA; 65104 MW; B17B538947A548B3 CRC64;
MASNPANLWV LLGLGLAGIF LFTKKFKKVL REDFGAFIHK LQLLPPPQPA PPKAPHPLTG
LTFAVSDLFD IEGYVTGFGH PDWAKTHEAA SRTSVVVSTL VEGGATCVGK TVIDELAYSI
TGENKHYGTP TNPVEPARVP GGSSSGAAVA VAANLVDFSL GVDTVGGVRV PAGFCGIIGF
RPSYGAISKI GVLPVSVSLD TVGWFAKDPN ILRRVGHVLL QSAFGGQRSP RQIIMADDCF
QLLKIPVDRI AQVVVKSTEK HFGRQLLKHE ILDVYLNSKV PSLKEFHNKK TNGEVKTSSI
RLLANVMQLL HRYEFRSNHE EWINTVKPIL EPNLSAQMNE IMELSDAEIE LCKSIREEMR
SAINSLLKDD GILVVPTTAY LPPKLGGKEI LSEEYQSSSF GLLSIASLSG CCQVTVPLGY
YNKCPVSVSL IARHGSDRFL LDTVQTMYKT LQEQAETYVN SKSSNKDSRE NSAEMAKEKG
NQAFKEQQWQ KAISYYNEAI KLNDKNATYY SNRAAAYLEL GSFQHAEADC SNAINLDKKN
VKAYLRRGTA REMLGYYKDA IEDFKYALVL EPTNKRASLS AERLQKVFAA GY
//
