ID B9LWQ1_HALLT Unreviewed; 412 AA.
AC B9LWQ1;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Transposase, IS605 OrfB family {ECO:0000313|EMBL:ACM58892.1};
GN OrderedLocusNames=Hlac_3375 {ECO:0000313|EMBL:ACM58892.1};
OS Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM
OS 34).
OG Plasmid pHLAC01 {ECO:0000313|EMBL:ACM58892.1,
OG ECO:0000313|Proteomes:UP000000740}.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC Halorubraceae; Halorubrum.
OX NCBI_TaxID=416348 {ECO:0000313|EMBL:ACM58892.1, ECO:0000313|Proteomes:UP000000740};
RN [1] {ECO:0000313|EMBL:ACM58892.1, ECO:0000313|Proteomes:UP000000740}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34
RC {ECO:0000313|Proteomes:UP000000740};
RX PubMed=27617060; DOI=10.1186/s40793-016-0194-2;
RA Anderson I.J., DasSarma P., Lucas S., Copeland A., Lapidus A.,
RA Del Rio T.G., Tice H., Dalin E., Bruce D.C., Goodwin L., Pitluck S.,
RA Sims D., Brettin T.S., Detter J.C., Han C.S., Larimer F., Hauser L.,
RA Land M., Ivanova N., Richardson P., Cavicchioli R., DasSarma S.,
RA Woese C.R., Kyrpides N.C.;
RT "Complete genome sequence of the Antarctic Halorubrum lacusprofundi type
RT strain ACAM 34.";
RL Stand. Genomic Sci. 11:70-70(2016).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP001367; ACM58892.1; -; Genomic_DNA.
DR RefSeq; WP_012660103.1; NC_012030.1.
DR AlphaFoldDB; B9LWQ1; -.
DR GeneID; 7402466; -.
DR KEGG; hla:Hlac_3375; -.
DR eggNOG; arCOG00679; Archaea.
DR HOGENOM; CLU_032903_3_3_2; -.
DR Proteomes; UP000000740; Plasmid pHLAC01.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR PANTHER; PTHR30405:SF25; TRANSPOSASE-RELATED; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Plasmid {ECO:0000313|EMBL:ACM58892.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000740};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 187..288
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 303..373
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 412 AA; 46744 MW; 6FC9CE8EC3365A6E CRC64;
MVGDSSTRTV PIKLDVDESA ANLLHQTTDH FLDAANYVVD VAWKPDWKIT SKQKLHDQTY
YDVRDESPLP ANLVQAARNR AAEAVKGCVE RWKKGKKASK PHFTSRFASY DARTGTVNDD
HATLATIDGR VTADFILPDE RRDTPHSAYL FNDDYDVNGA TLHYDEVEDC FYLHVRTKPA
VENDEAEQGD AKHVSVLGVD LGITNIATTS TGRFWSGGEL NHWHREYEKR RGDLQQTGTR
WAHENVQRVG RKQTGRFEQF LHTISNELVK EALENDCTHI VFEQLKGVRE RLPHAKAVHK
WAFHRLYEYV TYKAESKGVE VKQINPEYTS QRCSKCGFTH EDNRPHNNRQ DEFECLKCGY
EVHADYNAAK NIGLKYLRDQ QKSGRGGAPV GVRLNSGTLN VNGEYSPAPL TG
//
