ID B9LZG8_GEODF Unreviewed; 286 AA.
AC B9LZG8;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 65.
DE SubName: Full=Peptidoglycan L,D-transpeptidase, YkuD family {ECO:0000313|EMBL:ACM20721.1};
GN OrderedLocusNames=Geob_2367 {ECO:0000313|EMBL:ACM20721.1};
OS Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) (Geobacter
OS daltonii).
OC Bacteria; Thermodesulfobacteriota; Desulfuromonadia; Geobacterales;
OC Geobacteraceae; Geotalea.
OX NCBI_TaxID=316067 {ECO:0000313|EMBL:ACM20721.1, ECO:0000313|Proteomes:UP000007721};
RN [1] {ECO:0000313|EMBL:ACM20721.1, ECO:0000313|Proteomes:UP000007721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22248 / JCM 15807 / FRC-32
RC {ECO:0000313|Proteomes:UP000007721};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.,
RA Kostka J., Richardson P.;
RT "Complete sequence of Geobacter sp. FRC-32.";
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
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DR EMBL; CP001390; ACM20721.1; -; Genomic_DNA.
DR RefSeq; WP_012647450.1; NC_011979.1.
DR AlphaFoldDB; B9LZG8; -.
DR STRING; 316067.Geob_2367; -.
DR KEGG; geo:Geob_2367; -.
DR eggNOG; COG1376; Bacteria.
DR HOGENOM; CLU_972402_0_0_7; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000007721; Chromosome.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR30582; L,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30582:SF34; L,D-TRANSPEPTIDASE YCIB-RELATED; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007721};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 120..225
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 286 AA; 32416 MW; B66610F0D3D2BCD2 CRC64;
MIMPPGETMR RVFSTGLVLW IIFFFAAAFA AEEEKKLSPC EISYPSDVKI PWTCHRLKKN
ESMESLFGDR WQSVARFNRI DRRHALPGTR LKIPVNLEDV ENFAPVPAEL AYEASDKDPK
FILIDLTEQF LGVYDKGRLV FSSPIASGKS DFITPPGEFR IDAYSGRHES SLYTIEDKDI
PYPMHYGLRF LVNEEGVEYW IHGRDMPGYP ASHGCVGLYD EDMQKEYYGF PDYPLMDTAR
KLFEWAISPN HDVDGKLHPL KRGPRVLIVG EPPGGADGPP NMAPGP
//
