ID B9N4J3_POPTR Unreviewed; 431 AA.
AC B9N4J3;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 76.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=POPTR_005G024700 {ECO:0000313|EMBL:PNT34585.1};
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT34585.1, ECO:0000313|Proteomes:UP000006729};
RN [1] {ECO:0000313|EMBL:PNT34585.1, ECO:0000313|Proteomes:UP000006729}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
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DR EMBL; CM009294; PNT34585.1; -; Genomic_DNA.
DR RefSeq; XP_006382472.1; XM_006382410.1.
DR AlphaFoldDB; B9N4J3; -.
DR STRING; 3694.B9N4J3; -.
DR EnsemblPlants; Potri.005G024700.1.v4.1; Potri.005G024700.1.v4.1; Potri.005G024700.v4.1.
DR GeneID; 18098660; -.
DR Gramene; Potri.005G024700.1.v4.1; Potri.005G024700.1.v4.1; Potri.005G024700.v4.1.
DR KEGG; pop:18098660; -.
DR eggNOG; ENOG502QUWQ; Eukaryota.
DR HOGENOM; CLU_037685_0_0_1; -.
DR InParanoid; B9N4J3; -.
DR OMA; SHPCPYV; -.
DR OrthoDB; 448503at2759; -.
DR Proteomes; UP000006729; Chromosome 5.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044274; RFI2.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46798; OS09G0511500 PROTEIN; 1.
DR PANTHER; PTHR46798:SF3; RING FINGER FAMILY PROTEIN-RELATED; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 34..79
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 230..269
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..431
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..263
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 312..372
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 392..431
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 431 AA; 46343 MW; BD0AC259FAAFB9F2 CRC64;
MGLGNSGNDV IVDDGGGGGG GGLNGKSFGG SVSCSICLEV VTDNGDRSWA KLQCGHQFHL
DCIGSAFNVK GAMQCPNCRK IEKGQWLYAN GCRSLPEFTM DDWAHDEDLY DLSYSEMSFG
VHWCPFGSLA RLPSSFEEGE FPSNAYHDLL GHAIFAEHTA AVSSATHQCP YIAYFGPIHP
SSSNASVSVS DGSSFNNHWN GPSVPSEIPS SYAFPAMDIH YHSWEHHSPP FSTTGNRIGN
ADQPSVPPVT QRSARTSSDL PPRSGSLMHP FLVGHSSSAR AGSSVASSMI PPYQGSNARA
RDRVQALQAY YQQQQPGNSP PIHTPVVSGS RRSSSHRGLP QVGTVASTSD QTGFYFIPSG
ASSRNFQEAE NPPPTRFRSW ESHLPPFSVS QVDRDSGRST FHQAGGGSDP SIRSGSFRQR
HGSERMSSQN R
//
