GenomeNet

Database: UniProt
Entry: B9RGX3_RICCO
LinkDB: B9RGX3_RICCO
Original site: B9RGX3_RICCO 
ID   B9RGX3_RICCO            Unreviewed;       640 AA.
AC   B9RGX3;
DT   24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   24-MAR-2009, sequence version 1.
DT   27-MAR-2024, entry version 72.
DE   SubName: Full=Histone-lysine n-methyltransferase, suvh, putative {ECO:0000313|EMBL:EEF49335.1};
DE            EC=2.1.1.43 {ECO:0000313|EMBL:EEF49335.1};
GN   ORFNames=RCOM_1445080 {ECO:0000313|EMBL:EEF49335.1};
OS   Ricinus communis (Castor bean).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC   Ricinus.
OX   NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN   [1] {ECO:0000313|Proteomes:UP000008311}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX   PubMed=20729833; DOI=10.1038/nbt.1674;
RA   Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA   Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA   Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA   Rabinowicz P.D.;
RT   "Draft genome sequence of the oilseed species Ricinus communis.";
RL   Nat. Biotechnol. 28:951-956(2010).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00358}.
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DR   EMBL; EQ973778; EEF49335.1; -; Genomic_DNA.
DR   AlphaFoldDB; B9RGX3; -.
DR   STRING; 3988.B9RGX3; -.
DR   eggNOG; KOG1082; Eukaryota.
DR   InParanoid; B9RGX3; -.
DR   Proteomes; UP000008311; Unassembled WGS sequence.
DR   GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR   GO; GO:0042054; F:histone methyltransferase activity; IBA:GO_Central.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR   Gene3D; 2.170.270.10; SET domain; 1.
DR   Gene3D; 2.30.280.10; SRA-YDG; 1.
DR   InterPro; IPR025794; H3-K9-MeTrfase_plant.
DR   InterPro; IPR007728; Pre-SET_dom.
DR   InterPro; IPR015947; PUA-like_sf.
DR   InterPro; IPR001214; SET_dom.
DR   InterPro; IPR046341; SET_dom_sf.
DR   InterPro; IPR036987; SRA-YDG_sf.
DR   InterPro; IPR003105; SRA_YDG.
DR   PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR   PANTHER; PTHR45660:SF95; HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4; 1.
DR   Pfam; PF05033; Pre-SET; 1.
DR   Pfam; PF02182; SAD_SRA; 1.
DR   Pfam; PF00856; SET; 1.
DR   SMART; SM00468; PreSET; 1.
DR   SMART; SM00317; SET; 1.
DR   SMART; SM00466; SRA; 1.
DR   SUPFAM; SSF88697; PUA domain-like; 1.
DR   SUPFAM; SSF82199; SET domain; 1.
DR   PROSITE; PS50867; PRE_SET; 1.
DR   PROSITE; PS51575; SAM_MT43_SUVAR39_2; 1.
DR   PROSITE; PS50280; SET; 1.
DR   PROSITE; PS51015; YDG; 1.
PE   4: Predicted;
KW   Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW   Methyltransferase {ECO:0000313|EMBL:EEF49335.1};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00358}; Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW   Transferase {ECO:0000313|EMBL:EEF49335.1}.
FT   DOMAIN          188..341
FT                   /note="YDG"
FT                   /evidence="ECO:0000259|PROSITE:PS51015"
FT   DOMAIN          429..491
FT                   /note="Pre-SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50867"
FT   DOMAIN          494..640
FT                   /note="SET"
FT                   /evidence="ECO:0000259|PROSITE:PS50280"
FT   REGION          1..37
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          77..99
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        8..26
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   640 AA;  72546 MW;  7BFD9B862F108B82 CRC64;
     MVAVCVDSSR EVEREKENKS ITEGTMKRRV SARIQATKQQ RAEKEELVRK RVELLDENGE
     RNKKRANVFS RRRVNVDDVN EEHKHEHEHE HEHEHQDEHE EVMVVKEKEK EMQVSSTEAL
     KSQVANVNEK IAGVVTEKSV NARVKETLRL FNKHYLHFVQ KKAKRPDLKA ISKMIETNAI
     MYPEKKIGDL PGIDVGHQFY SRAEMVAIGF HSHWLNGIDY MGLSYSKEYR DYTFPIAIAI
     VLSGMYEDDL DNAEDVIYTG QGGHDLTGNK RQIRDQVMER GNLALKNCVE QSMPVRVVRG
     HESTSSYSGK VYTYDGLYKV VQYWAEKGIS GFTVYKYRLR RLEGQPTLTT NQVHFVYGRV
     PQSISEIRGL VCEDISRGQE VVPIPATNLV DDPPVPPTGI QFWTLNLSGF TYRKALQVSK
     NIKLPTNAVG CDCKGACLDP RTCACAKLNG SDFPYVHRDG GRLIEAKAIV FECGPNCGCG
     SHCVNRTAQR GLKYRFEVFR TPKKGWAVRS WDFIPSGAPI CEYVGVLRRT EDLDNVSENN
     YIFEIDCLQT MKGIGGRERR LGDVSVPTIS NTERLDDQKS ESVPEFCIDA GSYGNIARFI
     NHSCEPNLFV QCVLSSHQDL KLARVMLFAA DNIPPLQGCN
//
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