ID B9RNP6_RICCO Unreviewed; 629 AA.
AC B9RNP6;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 62.
DE SubName: Full=Cyclic nucleotide-gated ion channel, putative {ECO:0000313|EMBL:EEF46814.1};
GN ORFNames=RCOM_0919490 {ECO:0000313|EMBL:EEF46814.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
CC -!- SIMILARITY: Belongs to the cyclic nucleotide-gated cation channel (TC
CC 1.A.1.5) family. {ECO:0000256|ARBA:ARBA00010486}.
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DR EMBL; EQ973791; EEF46814.1; -; Genomic_DNA.
DR AlphaFoldDB; B9RNP6; -.
DR STRING; 3988.B9RNP6; -.
DR eggNOG; KOG0498; Eukaryota.
DR InParanoid; B9RNP6; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005216; F:monoatomic ion channel activity; IEA:InterPro.
DR CDD; cd00038; CAP_ED; 1.
DR Gene3D; 1.10.287.630; Helix hairpin bin; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR000595; cNMP-bd_dom.
DR InterPro; IPR018490; cNMP-bd_dom_sf.
DR InterPro; IPR005821; Ion_trans_dom.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR PANTHER; PTHR45651:SF9; CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED; 1.
DR PANTHER; PTHR45651; CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED; 1.
DR Pfam; PF00027; cNMP_binding; 1.
DR Pfam; PF00520; Ion_trans; 1.
DR SMART; SM00100; cNMP; 1.
DR SUPFAM; SSF51206; cAMP-binding domain-like; 1.
DR SUPFAM; SSF81324; Voltage-gated potassium channels; 1.
DR PROSITE; PS50042; CNMP_BINDING_3; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 80..98
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 118..137
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 172..191
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 203..222
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 243..264
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 391..474
FT /note="Cyclic nucleotide-binding"
FT /evidence="ECO:0000259|PROSITE:PS50042"
FT REGION 602..629
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 602..621
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 629 AA; 72814 MW; 158E94990416A7B3 CRC64;
MDFKKEKLVR FNEIQHLEKP LPLYTVSGQL LKAEGSASDP KTGHKFPKLG RFKVFPENHE
PWRKRILDPG TDVYLQWNRV FLFSCLVALF VDPLFFYLPS VANRGVTSCM DTDLNLGITV
TCFRTFADIF YILHLVVKFR TAYVAPSSRV FGRGELVVDP KKISWRYFKS DFFIDLIAAL
PLPQIVIWFI IPAIRGSHSD HTNNALVLIV LLQYIPRLYL IFPLSSEIIK ATGVVTKTAW
AGAAYNLLLY MLASHVLGAS WYLLSIERQA TCWKYACRHE ISPVNCSLSY LDCGTLSKDE
RRLWENSTQT YLQSITVRLE EWRLKRRDTE EWMRHRQLPQ NLRERVRRFV QYKWLATRGV
DEETILRALP KDLRRVIQRH LCLDLVRRVP FFSQMDDQLL DAICERLVSS LSTQGTCIVR
EGDPVIEMLF IIRGRLESST TNGGRTGFFN SITLRPGDFC GEELLAWALL PKSTLNLPSS
TRTVRALEEV EAFALRAEDL KFVANQFRRL HSKKLQHTFR FYSYHWRTWG ACFIQAAWRR
HKKRMMARSL TMCESFAYSV DEQVASETTQ EESMKSSTSS QAKQNLGVTI LASRFAANTR
RGAQKIKDVE MPKLQKPEEP DFSTEPDDD
//
