ID B9S226_RICCO Unreviewed; 627 AA.
AC B9S226;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Transcription factor, putative {ECO:0000313|EMBL:EEF42369.1};
GN ORFNames=RCOM_1326380 {ECO:0000313|EMBL:EEF42369.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ973846; EEF42369.1; -; Genomic_DNA.
DR RefSeq; XP_002520045.1; XM_002519999.2.
DR AlphaFoldDB; B9S226; -.
DR STRING; 3988.B9S226; -.
DR GeneID; 8280480; -.
DR KEGG; rcu:8280480; -.
DR eggNOG; KOG1246; Eukaryota.
DR InParanoid; B9S226; -.
DR OrthoDB; 998957at2759; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0000785; C:chromatin; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0032452; F:histone demethylase activity; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR004198; Znf_C5HC2.
DR PANTHER; PTHR10694:SF144; JMJC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 59..100
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 202..372
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 627 AA; 71011 MW; 25B80CE67542251D CRC64;
MKTTSRENAS KTFLSRGRRP RTKKTPFSQS NRSSIEKDKC TLEKYDLIDF KWTDEIPGCP
VFFPSNEEFE DPFSYLRKIS AEASEYGICK IVSPLKASVQ ASEVLRDFKF QTYVQPLRLA
EWDVDDKVTF SVGARNHTFD TFKRMAEEDF VRRFPGSEDV SPEYVEKKFW LEMSSGKEEA
VEYAVNVDGS AFSIDPDDGL GASKWNLKIL PRLPNSILHL VEHEIPGITF PMLYIGMLFS
MFAWHVEDHY LYSMNYHHTG APKTWYSVPG HAALQFEKVV LDHVYAHNML STDNEDGVFK
ELAEKTTMFP PSILLQHGVP VYKAVQMPGE FVVTFPRAYH AGFSNGFSCG EAVNFAVGDW
FPFGALASKL YARIGMMAIL PCEEILCKEI ARLLTHEEFG CSSAEMASSK SVKSFFIQHM
RIFNNSFWQL VNNVENTRDS SMLLPNSHGT VICRTCKRDC YLAFLECNQC YNLLCHFHDI
KSLACACGGK IILFIRENIW DMEDLARRLE KDGMFQKAQN EAKRGNNVGL PTNATVSCIK
SEPIPTSKNM DHEWRGIVKR TITSTKETAE IKVRGEDDNG DFDMVKPDST GLLPFLMSGC
KRARTGCKLQ KTPTKFGKSA SEVPSSA
//
