ID B9SE84_RICCO Unreviewed; 437 AA.
AC B9SE84;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=Polypyrimidine tract binding protein, putative {ECO:0000313|EMBL:EEF38043.1};
DE EC=1.3.1.74 {ECO:0000313|EMBL:EEF38043.1};
GN ORFNames=RCOM_0959720 {ECO:0000313|EMBL:EEF38043.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ973935; EEF38043.1; -; Genomic_DNA.
DR AlphaFoldDB; B9SE84; -.
DR STRING; 3988.B9SE84; -.
DR eggNOG; KOG1190; Eukaryota.
DR InParanoid; B9SE84; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0032440; F:2-alkenal reductase [NAD(P)+] activity; IEA:UniProtKB-EC.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0043484; P:regulation of RNA splicing; IBA:GO_Central.
DR CDD; cd12687; RRM1_PTBPH3; 1.
DR CDD; cd12698; RRM3_PTBPH3; 1.
DR CDD; cd12426; RRM4_PTBPH3; 1.
DR Gene3D; 3.30.70.330; -; 4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR021790; PTBP1-like_RRM2.
DR InterPro; IPR034795; PTBPH3_RRM1.
DR InterPro; IPR034797; PTBPH3_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF18; SMOOTH, ISOFORM T; 1.
DR Pfam; PF00076; RRM_1; 2.
DR Pfam; PF13893; RRM_5; 1.
DR Pfam; PF11835; RRM_8; 1.
DR SMART; SM00360; RRM; 4.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000313|EMBL:EEF38043.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000008311};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 6..80
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 246..320
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 356..430
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 190..209
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 437 AA; 48637 MW; 2E9BC0B82345CFEE CRC64;
MAEPSKVIHV RNVGHEISEN DLLQLFQPFG VITKLVMLRA KNQALLQMQD IPSAINALQF
YGNVQPTIRG RNVYVQFSSH QELTTMDQNS QGRADEPFVL AVRFKSNFDG INIIVEVLHQ
VFSPHGFVEK IVTFQKSAGF QALIQYQLRQ SAVAARTALQ GRNIYDGCCQ LDIQFSNLDE
LQVNYNNDRS RDFTNPHLPA EQKGRSSQAG YGDAGVAYPQ MANAAAIAAA FGGGLPPGIS
GTNDRCTVLV SNLNPDKIDE DKLFNLFSLY GNIVRIKLLR NKPDHALVQM GDGFQAELAV
HFLKGAVLFG KRLEVNFSKH PNITQGADTH EYVNSNLNRF NRNAAKNYRY CCSPTKMIHL
STLPQDITEE EIVSHLEEHG TIVNTKLFEM NGKKQALVLF ETEEQATEAL VCKHAISVAG
SIIRISFSQL QSIRESS
//
