ID B9TF24_RICCO Unreviewed; 495 AA.
AC B9TF24;
DT 24-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 24-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=Gp5/Type VI secretion system Vgr protein OB-fold domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=RCOM_1885010 {ECO:0000313|EMBL:EEF25540.1};
OS Ricinus communis (Castor bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae;
OC Ricinus.
OX NCBI_TaxID=3988 {ECO:0000313|Proteomes:UP000008311};
RN [1] {ECO:0000313|Proteomes:UP000008311}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Hale {ECO:0000313|Proteomes:UP000008311};
RX PubMed=20729833; DOI=10.1038/nbt.1674;
RA Chan A.P., Crabtree J., Zhao Q., Lorenzi H., Orvis J., Puiu D.,
RA Melake-Berhan A., Jones K.M., Redman J., Chen G., Cahoon E.B., Gedil M.,
RA Stanke M., Haas B.J., Wortman J.R., Fraser-Liggett C.M., Ravel J.,
RA Rabinowicz P.D.;
RT "Draft genome sequence of the oilseed species Ricinus communis.";
RL Nat. Biotechnol. 28:951-956(2010).
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DR EMBL; EQ979461; EEF25540.1; -; Genomic_DNA.
DR AlphaFoldDB; B9TF24; -.
DR STRING; 3988.B9TF24; -.
DR InParanoid; B9TF24; -.
DR Proteomes; UP000008311; Unassembled WGS sequence.
DR Gene3D; 2.30.110.50; -; 1.
DR Gene3D; 2.40.50.230; Gp5 N-terminal domain; 1.
DR InterPro; IPR006531; Gp5/Vgr_OB.
DR InterPro; IPR028244; T6SS_Rhs_Vgr_dom.
DR InterPro; IPR006533; T6SS_Vgr_RhsGE.
DR InterPro; IPR037026; Vgr_OB-fold_dom_sf.
DR InterPro; IPR018769; VgrG2_DUF2345.
DR NCBIfam; TIGR01646; vgr_GE; 1.
DR PANTHER; PTHR32305; -; 1.
DR PANTHER; PTHR32305:SF15; PROTEIN RHSA-RELATED; 1.
DR Pfam; PF10106; DUF2345; 1.
DR Pfam; PF04717; Phage_base_V; 1.
DR Pfam; PF05954; Phage_GPD; 1.
DR Pfam; PF13296; T6SS_Vgr; 1.
DR SUPFAM; SSF69255; gp5 N-terminal domain-like; 1.
DR SUPFAM; SSF69349; Phage fibre proteins; 1.
DR SUPFAM; SSF69279; Phage tail proteins; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008311}.
FT DOMAIN 206..262
FT /note="Gp5/Type VI secretion system Vgr protein OB-fold"
FT /evidence="ECO:0000259|Pfam:PF04717"
FT DOMAIN 289..399
FT /note="Putative type VI secretion system Rhs element
FT associated Vgr"
FT /evidence="ECO:0000259|Pfam:PF13296"
FT DOMAIN 431..494
FT /note="DUF2345"
FT /evidence="ECO:0000259|Pfam:PF10106"
FT NON_TER 495
FT /evidence="ECO:0000313|EMBL:EEF25540.1"
SQ SEQUENCE 495 AA; 53174 MW; 78E494CE96E21FFD CRC64;
MAAQVLSQAD QGGRGTPLAT TLDEYHVAAP HLGDSPIDLQ ELNDTHMAYH EYACKWFRGE
GGVRDLAVGE WFSLEGHPEI DTHPAGEREF VVTSQHILAQ NNLPVEIGAR VERLFERNGW
TGGASQSRSS GGEHPLRYRT SFTCVRRGVR IVPPRPVPPR PQVQTAIVVG PENETVWCDH
LGRVKVRFLA TRPEDHAHAS GAGSSDSDRD SAWVRVASSW AGNGQGGNAQ CGARLLPPVG
TEVLIDFAGG DPDKPVIVGQ AYNGDAPPPA FLGEDWLPDT RYQSGLRSRE VRGRRGNQLR
LDDTPDQISA QLASDHGATE LNLGYLTEPR MRGGAHARGE GAELRTDEAI ALRAARGILL
SAWKLLGGSG NKGAQLARHE YLDLLRECGE LCTSLGSYAA ENNGLALDTK EQEALHARFR
QWEDGSNTAP HATEPREPVI AITAPAGIGF ASSRAIVSYS ATSIDTAAQQ NLQFTAGQRY
AVSAGNGISL FARGG
//