ID B9XG18_PEDPL Unreviewed; 640 AA.
AC B9XG18;
DT 14-APR-2009, integrated into UniProtKB/TrEMBL.
DT 14-APR-2009, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Ribonuclease G {ECO:0000256|ARBA:ARBA00017719};
GN ORFNames=Cflav_PD3897 {ECO:0000313|EMBL:EEF61180.1};
OS Pedosphaera parvula (strain Ellin514).
OC Bacteria; Verrucomicrobiota; Verrucomicrobiae; Limisphaerales; Pedosphaera.
OX NCBI_TaxID=320771 {ECO:0000313|EMBL:EEF61180.1, ECO:0000313|Proteomes:UP000003688};
RN [1] {ECO:0000313|EMBL:EEF61180.1, ECO:0000313|Proteomes:UP000003688}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ellin514 {ECO:0000313|EMBL:EEF61180.1,
RC ECO:0000313|Proteomes:UP000003688};
RX PubMed=21460084; DOI=10.1128/JB.00299-11;
RA Kant R., van Passel M.W., Sangwan P., Palva A., Lucas S., Copeland A.,
RA Lapidus A., Glavina Del Rio T., Dalin E., Tice H., Bruce D., Goodwin L.,
RA Pitluck S., Chertkov O., Larimer F.W., Land M.L., Hauser L., Brettin T.S.,
RA Detter J.C., Han S., de Vos W.M., Janssen P.H., Smidt H.;
RT "Genome sequence of 'Pedosphaera parvula' Ellin514, an aerobic
RT Verrucomicrobial isolate from pasture soil.";
RL J. Bacteriol. 193:2900-2901(2011).
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RNase E/G family. RNase G subfamily.
CC {ECO:0000256|ARBA:ARBA00005663}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEF61180.1}.
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DR EMBL; ABOX02000011; EEF61180.1; -; Genomic_DNA.
DR AlphaFoldDB; B9XG18; -.
DR STRING; 320771.Cflav_PD3897; -.
DR OrthoDB; 9804278at2; -.
DR Proteomes; UP000003688; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd04453; S1_RNase_E; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR InterPro; IPR004659; RNase_E/G.
DR InterPro; IPR048583; RNase_E_G_thioredoxin-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00757; RNaseEG; 1.
DR PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR PANTHER; PTHR30001:SF1; RIBONUCLEASE E_G-LIKE PROTEIN, CHLOROPLASTIC; 1.
DR Pfam; PF10150; RNase_E_G; 1.
DR Pfam; PF20833; RNase_E_G_Thio; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
PE 3: Inferred from homology;
KW Cell inner membrane {ECO:0000256|ARBA:ARBA00022519};
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000003688};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 167..261
FT /note="S1 motif"
FT /evidence="ECO:0000259|SMART:SM00316"
SQ SEQUENCE 640 AA; 72987 MW; 5A12CBB030D7CB66 CRC64;
MRFRPSQGLN PNPHKHDREA LEARAEVVGD ASAQDKVYDR GRHANEIERA ENLAAGLPAE
GTPAVEQTKA EVEQGGFREP NLETPAEVHE EKPYEPVTIQ QKPQGIVETI KAAASNVIKK
VQRLIRPIKK SHKEVIINAE SLETRVAVLE EGKLEEFTIE RTTEERLVGS IFKGKVRNLE
DGLKAAFVDI GFEKNAFLHY WDIVPSNFDS GVEVVERETK KRDKPRITQK DIPRLYPPGS
DIIVQVTKGP IGTKGPRVTT NLVLPGRYLV LLPNSDQSGI SRKIENQQER QRLKKILRTL
NIPDGMGVII RTVGEGQQLR YFVRDLALLI EEWNLIQDRI KNQPSATCVF QEPDLIERTV
RDFLTEDVER IVVDNPKAYD RMREMISKIS RRSASKVKLY GDSQAVFDRF NISKQLENAF
SRQVHLKSGG YIVVDETEAL VAIDVNTGRH KGGKDQETAI LKVNIEAADE ISRQLRLRNM
GGLIVLDFID MKSRRDQQSV YQRMKDGLRR DKAKTHILPI SQLGLMEMTR QRHSESVHAA
VYEECPYCKG RGKVKSALTM SVEIQRKLSE ILKRRSRDES DFQLRIVVHP SVLERLRNED
EKHLIEMEKR YFGKLSFRAE PSLHAELFKI VNVANGEELT
//
