GenomeNet

Database: UniProt
Entry: B9XHS1_PEDPL
LinkDB: B9XHS1_PEDPL
Original site: B9XHS1_PEDPL 
ID   B9XHS1_PEDPL            Unreviewed;       177 AA.
AC   B9XHS1;
DT   14-APR-2009, integrated into UniProtKB/TrEMBL.
DT   14-APR-2009, sequence version 1.
DT   27-MAR-2024, entry version 41.
DE   RecName: Full=YprB ribonuclease H-like domain-containing protein {ECO:0000259|Pfam:PF13482};
GN   ORFNames=Cflav_PD6240 {ECO:0000313|EMBL:EEF60649.1};
OS   Pedosphaera parvula (strain Ellin514).
OC   Bacteria; Verrucomicrobiota; Verrucomicrobiae; Limisphaerales; Pedosphaera.
OX   NCBI_TaxID=320771 {ECO:0000313|EMBL:EEF60649.1, ECO:0000313|Proteomes:UP000003688};
RN   [1] {ECO:0000313|EMBL:EEF60649.1, ECO:0000313|Proteomes:UP000003688}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ellin514 {ECO:0000313|EMBL:EEF60649.1,
RC   ECO:0000313|Proteomes:UP000003688};
RX   PubMed=21460084; DOI=10.1128/JB.00299-11;
RA   Kant R., van Passel M.W., Sangwan P., Palva A., Lucas S., Copeland A.,
RA   Lapidus A., Glavina Del Rio T., Dalin E., Tice H., Bruce D., Goodwin L.,
RA   Pitluck S., Chertkov O., Larimer F.W., Land M.L., Hauser L., Brettin T.S.,
RA   Detter J.C., Han S., de Vos W.M., Janssen P.H., Smidt H.;
RT   "Genome sequence of 'Pedosphaera parvula' Ellin514, an aerobic
RT   Verrucomicrobial isolate from pasture soil.";
RL   J. Bacteriol. 193:2900-2901(2011).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EEF60649.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; ABOX02000015; EEF60649.1; -; Genomic_DNA.
DR   RefSeq; WP_007415365.1; NZ_ABOX02000015.1.
DR   AlphaFoldDB; B9XHS1; -.
DR   STRING; 320771.Cflav_PD6240; -.
DR   OrthoDB; 9815222at2; -.
DR   Proteomes; UP000003688; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR038720; YprB_RNase_H-like_dom.
DR   Pfam; PF13482; RNase_H_2; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000003688}.
FT   DOMAIN          5..154
FT                   /note="YprB ribonuclease H-like"
FT                   /evidence="ECO:0000259|Pfam:PF13482"
SQ   SEQUENCE   177 AA;  20544 MW;  CE88F0881F117E31 CRC64;
     MKNIVYFDLE TQKSAEEVGG WDKISAMRMS IGVTYSTARG DYKIYGEKQV DDLLTELQRA
     DLVVGFNHLR FDYEVLHGYT SMDLRQLPTL DMLVELQNTL QHRLSLDSIA TATFGLEKTA
     EGLQAIEWFR QGKLMEIAEY CCFDVKLTKM VYEHGVNYKE LHYHNRFGKK LTVAVKW
//
DBGET integrated database retrieval system