ID B9XT21_PEDPL Unreviewed; 263 AA.
AC B9XT21;
DT 14-APR-2009, integrated into UniProtKB/TrEMBL.
DT 14-APR-2009, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=Restriction endonuclease {ECO:0000313|EMBL:EEF57011.1};
GN ORFNames=Cflav_PD0040 {ECO:0000313|EMBL:EEF57011.1};
OS Pedosphaera parvula (strain Ellin514).
OC Bacteria; Verrucomicrobiota; Verrucomicrobiae; Limisphaerales; Pedosphaera.
OX NCBI_TaxID=320771 {ECO:0000313|EMBL:EEF57011.1, ECO:0000313|Proteomes:UP000003688};
RN [1] {ECO:0000313|EMBL:EEF57011.1, ECO:0000313|Proteomes:UP000003688}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Ellin514 {ECO:0000313|EMBL:EEF57011.1,
RC ECO:0000313|Proteomes:UP000003688};
RX PubMed=21460084; DOI=10.1128/JB.00299-11;
RA Kant R., van Passel M.W., Sangwan P., Palva A., Lucas S., Copeland A.,
RA Lapidus A., Glavina Del Rio T., Dalin E., Tice H., Bruce D., Goodwin L.,
RA Pitluck S., Chertkov O., Larimer F.W., Land M.L., Hauser L., Brettin T.S.,
RA Detter J.C., Han S., de Vos W.M., Janssen P.H., Smidt H.;
RT "Genome sequence of 'Pedosphaera parvula' Ellin514, an aerobic
RT Verrucomicrobial isolate from pasture soil.";
RL J. Bacteriol. 193:2900-2901(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEF57011.1}.
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DR EMBL; ABOX02000093; EEF57011.1; -; Genomic_DNA.
DR RefSeq; WP_007418954.1; NZ_ABOX02000093.1.
DR AlphaFoldDB; B9XT21; -.
DR STRING; 320771.Cflav_PD0040; -.
DR OrthoDB; 5782056at2; -.
DR Proteomes; UP000003688; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003916; F:DNA topoisomerase activity; IEA:InterPro.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:InterPro.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR Gene3D; 3.40.1350.10; -; 1.
DR Gene3D; 3.30.65.10; Bacterial Topoisomerase I, domain 1; 1.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR007560; Restrct_endonuc_IV_Mrr.
DR InterPro; IPR013498; Topo_IA_Znf.
DR InterPro; IPR011856; tRNA_endonuc-like_dom_sf.
DR PANTHER; PTHR30015; MRR RESTRICTION SYSTEM PROTEIN; 1.
DR PANTHER; PTHR30015:SF6; SLL1429 PROTEIN; 1.
DR Pfam; PF04471; Mrr_cat; 1.
DR Pfam; PF01396; zf-C4_Topoisom; 1.
DR SUPFAM; SSF52980; Restriction endonuclease-like; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
PE 4: Predicted;
KW Endonuclease {ECO:0000313|EMBL:EEF57011.1};
KW Hydrolase {ECO:0000313|EMBL:EEF57011.1};
KW Membrane {ECO:0000256|SAM:Phobius}; Nuclease {ECO:0000313|EMBL:EEF57011.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000003688};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..28
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 34..54
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 93..203
FT /note="Restriction endonuclease type IV Mrr"
FT /evidence="ECO:0000259|Pfam:PF04471"
FT DOMAIN 224..262
FT /note="DNA topoisomerase type IA zn finger"
FT /evidence="ECO:0000259|Pfam:PF01396"
FT REGION 61..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..85
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 263 AA; 29745 MW; 88A013B9A11EC86E CRC64;
MSRRRRNDPL DALPQLAGLV ILAVFFIPGA SRLLIWGAAI FFILLVAFII FRIATRKNRS
QTTTTRAPKT TLHSHAPTPS HTAPAPTLSE KLHHIDWYQF EKLLGILYRS KGYFIHRLGG
AQPDGGVDLI IEREGIKTII QCKHWESWTV GVRNIREFLG TLTDQQISQG IYVTLKGYTN
GALQLAKKHN ITLLGEPELM ALCENLNWKQ NPEILSLLND TRKLCPKCES EMVLRTSGRG
PNRGNQFWGC STYPKCHYIL NIS
//
