ID B9Y9A8_9FIRM Unreviewed; 1016 AA.
AC B9Y9A8;
DT 14-APR-2009, integrated into UniProtKB/TrEMBL.
DT 14-APR-2009, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE SubName: Full=CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEF67397.1};
GN ORFNames=HOLDEFILI_02413 {ECO:0000313|EMBL:EEF67397.1};
OS Holdemania filiformis DSM 12042.
OC Bacteria; Bacillota; Erysipelotrichia; Erysipelotrichales;
OC Erysipelotrichaceae; Holdemania.
OX NCBI_TaxID=545696 {ECO:0000313|EMBL:EEF67397.1, ECO:0000313|Proteomes:UP000005950};
RN [1] {ECO:0000313|EMBL:EEF67397.1, ECO:0000313|Proteomes:UP000005950}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12042 {ECO:0000313|EMBL:EEF67397.1,
RC ECO:0000313|Proteomes:UP000005950};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEF67397.1, ECO:0000313|Proteomes:UP000005950}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 12042 {ECO:0000313|EMBL:EEF67397.1,
RC ECO:0000313|Proteomes:UP000005950};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Holdemania filiformis DSM 12042.";
RL Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEF67397.1}.
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DR EMBL; ACCF01000142; EEF67397.1; -; Genomic_DNA.
DR RefSeq; WP_006059587.1; NZ_GG657557.1.
DR AlphaFoldDB; B9Y9A8; -.
DR STRING; 545696.HOLDEFILI_02413; -.
DR eggNOG; COG0358; Bacteria.
DR eggNOG; COG4227; Bacteria.
DR HOGENOM; CLU_002880_0_0_9; -.
DR OrthoDB; 9803716at2; -.
DR Proteomes; UP000005950; Unassembled WGS sequence.
DR GO; GO:0003896; F:DNA primase activity; IEA:InterPro.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.90.580.10; Zinc finger, CHC2-type domain; 1.
DR InterPro; IPR013610; ArdC_N.
DR InterPro; IPR036977; DNA_primase_Znf_CHC2.
DR InterPro; IPR025465; DUF4316.
DR InterPro; IPR040568; LPD16.
DR InterPro; IPR040809; LPD28.
DR InterPro; IPR025923; YodL-like.
DR InterPro; IPR002694; Znf_CHC2.
DR PANTHER; PTHR30313; DNA PRIMASE; 1.
DR PANTHER; PTHR30313:SF2; DNA PRIMASE; 1.
DR Pfam; PF08401; ArdcN; 1.
DR Pfam; PF14195; DUF4316; 1.
DR Pfam; PF18830; LPD16; 1.
DR Pfam; PF18843; LPD28; 1.
DR Pfam; PF14191; YodL; 1.
DR Pfam; PF01807; zf-CHC2; 1.
DR SMART; SM00400; ZnF_CHCC; 1.
DR SUPFAM; SSF57783; Zinc beta-ribbon; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 31..81
FT /note="Zinc finger CHC2-type"
FT /evidence="ECO:0000259|SMART:SM00400"
FT REGION 978..1016
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1016 AA; 116122 MW; D161E43F00B708F2 CRC64;
MAENVFEAVK QSVSTREAAA FYGIEVKRNG MACCPFHDDK NPSMKVDQRF HCFGCGADGD
VIDFTAKLFD LSPKEAAEKL AQDFGLIYDS QAPPRRRYVR QKTEAQKFRE DRQQCYRVLS
DYYYLLKKWE ADHSPRTPEE KPHPRFVEAI HKKIYVEYLL DLFLYESEEE QKAWIAEHTA
EITHLERRLK IMAENKPTNR ERLREITDGI EQGIKELFES EKYMRYLSVM SRFHRYSVNN
TMLIYMQKPD ATLVAGYNKW KDQFERHVKK GEHGITIIAP TPYKKKIEEQ KLDPDTKAPI
LDKDGKIITE EKEIEIPMFR PVKVFDVSQT DGKPLPELAS SLSGNVPNYE AFMEALRRSA
PMPITFEAMA ADTDGYFSAD HQKIAIRQGM SEVQTVSATV HEIAHSKLHN QKKIQIANDE
QYQEIELFDK PGLFSNGRIV RDNLPEGVYC YDLRGSDYDP GEPVCVEERV VVNHAGSVLL
TDPLELAENG RLMLTEEEGL NFVGGFSTLA QFLQEQKKDR HTEEVEAESI SYAVCKYFGI
ETGENSFGYI ASWSQGKELK ELRASLETIN KTSGTLISDI ERHYKEICKE RGIDPNAKKE
PEMAVLDAEA NQQEALFLID DATYLHIQPC DSGWDYTLYD AASMKELDGG QLDMPELSRM
KAVLQICDDN DLDSTSLRHA PLSMIETLQE AAYQQMQAEV GQMAASSQLP EAQEQALDEY
PTPDEQVSTP DMQKYGYSYD GMLPVTRERA LELDAAGLTV YVLHEDNTES MVFDPQEIME
HGGLFGVDRE EWEKSPQFHE KVMERQEHQQ EREQAFLSQN RNCFAIYQVS RNDPQNVRFM
NLDWLESHDV SVDRSNYDLI YTAPLSESGT VPEQLEKLYQ QFNLEKPVDF HSPSMSVSDI
VAIKQDGKVS CHYCDSVGFT QIPGFLPENP LKNAEMALED DYGMIDGIIN NGAKEPTVAE
LEQQARSGQP ISLMELAAAT HREEREKKKS VMEQLKGQPK TEHKKTAPKK SAEREI
//