ID BXL7_ARATH Reviewed; 767 AA.
AC Q9SGZ5; Q8VZG5;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 22-SEP-2009, sequence version 2.
DT 27-MAR-2024, entry version 115.
DE RecName: Full=Probable beta-D-xylosidase 7;
DE Short=AtBXL7;
DE EC=3.2.1.-;
DE Flags: Precursor;
GN Name=BXL7; OrderedLocusNames=At1g78060; ORFNames=F28K19.27, F28K19.32;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP IDENTIFICATION.
RX PubMed=12609041; DOI=10.1046/j.1365-313x.2003.01654.x;
RA Goujon T., Minic Z., El Amrani A., Lerouxel O., Aletti E., Lapierre C.,
RA Joseleau J.-P., Jouanin L.;
RT "AtBXL1, a novel higher plant (Arabidopsis thaliana) putative beta-
RT xylosidase gene, is involved in secondary cell wall metabolism and plant
RT development.";
RL Plant J. 33:677-690(2003).
CC -!- SUBCELLULAR LOCATION: Secreted, extracellular space, extracellular
CC matrix {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 3 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF17692.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC009243; AAF17692.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002684; AEE36063.1; -; Genomic_DNA.
DR EMBL; AY064977; AAL57631.1; -; mRNA.
DR RefSeq; NP_177929.1; NM_106455.3.
DR AlphaFoldDB; Q9SGZ5; -.
DR SMR; Q9SGZ5; -.
DR STRING; 3702.Q9SGZ5; -.
DR CAZy; GH3; Glycoside Hydrolase Family 3.
DR GlyCosmos; Q9SGZ5; 2 sites, No reported glycans.
DR PaxDb; 3702-AT1G78060-1; -.
DR ProteomicsDB; 240381; -.
DR EnsemblPlants; AT1G78060.1; AT1G78060.1; AT1G78060.
DR GeneID; 844141; -.
DR Gramene; AT1G78060.1; AT1G78060.1; AT1G78060.
DR KEGG; ath:AT1G78060; -.
DR Araport; AT1G78060; -.
DR TAIR; AT1G78060; -.
DR eggNOG; ENOG502QQ55; Eukaryota.
DR HOGENOM; CLU_004542_5_3_1; -.
DR InParanoid; Q9SGZ5; -.
DR OMA; CALGKPC; -.
DR OrthoDB; 2963694at2759; -.
DR PhylomeDB; Q9SGZ5; -.
DR BioCyc; ARA:AT1G78060-MONOMER; -.
DR PRO; PR:Q9SGZ5; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SGZ5; baseline and differential.
DR Genevisible; Q9SGZ5; AT.
DR GO; GO:0048046; C:apoplast; HDA:TAIR.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR GO; GO:0009505; C:plant-type cell wall; HDA:TAIR.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0009044; F:xylan 1,4-beta-xylosidase activity; IEA:InterPro.
DR GO; GO:0045493; P:xylan catabolic process; IEA:InterPro.
DR Gene3D; 3.40.50.1700; Glycoside hydrolase family 3 C-terminal domain; 1.
DR Gene3D; 3.20.20.300; Glycoside hydrolase, family 3, N-terminal domain; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044993; BXL.
DR InterPro; IPR026891; Fn3-like.
DR InterPro; IPR002772; Glyco_hydro_3_C.
DR InterPro; IPR036881; Glyco_hydro_3_C_sf.
DR InterPro; IPR001764; Glyco_hydro_3_N.
DR InterPro; IPR036962; Glyco_hydro_3_N_sf.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR PANTHER; PTHR42721:SF3; BETA-D-XYLOSIDASE 5-RELATED; 1.
DR PANTHER; PTHR42721; SUGAR HYDROLASE-RELATED; 1.
DR Pfam; PF14310; Fn3-like; 1.
DR Pfam; PF00933; Glyco_hydro_3; 1.
DR Pfam; PF01915; Glyco_hydro_3_C; 1.
DR SMART; SM01217; Fn3_like; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF52279; Beta-D-glucan exohydrolase, C-terminal domain; 1.
PE 2: Evidence at transcript level;
KW Extracellular matrix; Glycoprotein; Glycosidase; Hydrolase;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..19
FT /evidence="ECO:0000255"
FT CHAIN 20..767
FT /note="Probable beta-D-xylosidase 7"
FT /id="PRO_0000384062"
FT ACT_SITE 292
FT /evidence="ECO:0000250"
FT CARBOHYD 100
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 643
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 767 AA; 83892 MW; 97F2E4B79A9A2FF5 CRC64;
MAKQLLLLLL LFIVHGVESA PPPHSCDPSN PTTKLYQFCR TDLPIGKRAR DLVSRLTIDE
KISQLVNTAP GIPRLGVPAY EWWSEALHGV AYAGPGIRFN GTVKAATSFP QVILTAASFD
SYEWFRIAQV IGKEARGVYN AGQANGMTFW APNINIFRDP RWGRGQETPG EDPMMTGTYA
VAYVRGLQGD SFDGRKTLSN HLQASACCKH FTAYDLDRWK GITRYVFNAQ VSLADLAETY
QPPFKKCIEE GRASGIMCAY NRVNGIPSCA DPNLLTRTAR GQWAFRGYIT SDCDAVSIIY
DAQGYAKSPE DAVADVLKAG MDVNCGSYLQ KHTKSALQQK KVSETDIDRA LLNLFSVRIR
LGLFNGDPTK LPYGNISPNE VCSPAHQALA LDAARNGIVL LKNNLKLLPF SKRSVSSLAV
IGPNAHVVKT LLGNYAGPPC KTVTPLDALR SYVKNAVYHQ GCDSVACSNA AIDQAVAIAK
NADHVVLIMG LDQTQEKEDF DRVDLSLPGK QQELITSVAN AAKKPVVLVL ICGGPVDISF
AANNNKIGSI IWAGYPGEAG GIAISEIIFG DHNPGGRLPV TWYPQSFVNI QMTDMRMRSA
TGYPGRTYKF YKGPKVYEFG HGLSYSAYSY RFKTLAETNL YLNQSKAQTN SDSVRYTLVS
EMGKEGCDVA KTKVTVEVEN QGEMAGKHPV LMFARHERGG EDGKRAEKQL VGFKSIVLSN
GEKAEMEFEI GLCEHLSRAN EFGVMVLEEG KYFLTVGDSE LPLIVNV
//
